Physcomitrium patens (spreading earthmoss): 112275986
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Entry
112275986 CDS
T01041
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00906
Carotenoid biosynthesis
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
Module
ppp_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112275986
Enzymes [BR:
ppp01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
112275986
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GDI
HI0933_like
GIDA
Thi4
Pyr_redox_2
FAD_binding_3
MCRA
Motif
Other DBs
NCBI-GeneID:
112275986
NCBI-ProteinID:
XP_024362655
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Position
23:complement(659891..662825)
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AA seq
605 aa
AA seq
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MAISNPHFSTLGLASPICESSRKKSPLSCSFSKTIAHLPQQLCAATFQLQSFEGNSIHTR
ACDRGARAAVAADTSPISTKGVSGTEEYDAIVIGSGIGGLVAATQLAVRGARVVLLEKYV
VPGGSSSYFQRDGYTFDVGSSVMFGFSDKGSINLVTKSLAAVGRSLELIEDPVTVHYHLP
GDLSVQVHREYDKFLVELISRFPHEEVGIRAFYDVAWQVFNSLNALELKSLEEPLYLFGQ
FFKNPVACLTLAYYLPQNAGDIARKYMKDPNLLAFIDAECFIVSTVDACRTPMINASMVM
CDRHYGGINYPKGGVGRIALELADGLVEHGGHLKYKANVTQILMKDGKAVGVQLSNGETL
YAKTVISNATRWDTFQKLLKAEDMPQEEKNFQKLYRKSPSFLSIHMGVKAEVLPHGTECH
HLVLEDEWLKLEEPYQTIFLSIPTVLDTSLAPPGRHILHIFTTAWIDDWQGLSPADYEAK
KEAVADKIVSRLEATLFPGLKDATTFREVGTPKTHRRYLARDDGTYGPIPAGKPKGLLGM
PFNTTAVEGLYCVGDSCFPGQGVIAVAFSGTMCAHRVAADLGFEKRNAVLDKGLSSLLAW
FRTLA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccatctcaaatccgcatttcagcaccctggggttggccagccctatctgcgaatcc
tctagaaaaaaatctcctctctcttgctcattctctaagacaatcgctcatcttcctcag
cagctttgtgccgcaacttttcagcttcagagttttgaggggaatagcatccatactcga
gcttgcgacaggggagctcgagcagcggttgctgctgacacctcaccgatttcaaccaaa
ggcgtctctggaactgaggaatacgatgccattgttataggctctggcattgggggcctt
gttgccgctactcaattggcagttcgaggggctcgggtcgtccttctggagaaatacgtc
gtcccaggtgggagctccagttactttcaaagggatggctacactttcgatgtaggttcc
tctgtgatgtttgggttcagcgacaaaggctccattaatttggtaacaaaatccctggca
gccgtcggacgttcattggaattgatcgaggatccagtgacagtgcactaccacctccct
ggtgatttgtccgtgcaagtgcaccgggagtatgacaagttcctcgtggagctcattagc
cggttccctcacgaggaggtcggtatccgcgccttctacgatgtagcctggcaggtgttt
aattccttgaatgcgttggagctcaaatctttagaggagcctctgtatctattcggacag
ttcttcaagaaccccgtcgcttgcttgacgctcgcgtattacctacctcagaatgcaggt
gacatagccaggaaatacatgaaggaccccaacctgttggctttcatagacgccgagtgc
ttcattgtgagcactgtggacgcctgccggacgcccatgatcaatgccagtatggtaatg
tgcgacagacattacggaggtatcaactacccgaaaggaggagtggggcggattgcactg
gagcttgcagatggcctcgtggagcatggtggccatttgaagtacaaagccaatgtgacg
caaattcttatgaaggacgggaaggcagtaggagtgcagttgtccaacggggaaacgctc
tatgcgaaaacagttatctcgaatgctacgagatgggacacttttcagaaattgctgaag
gctgaggatatgccgcaggaggaaaagaatttccagaagttgtatcggaagtcgccttct
ttcttatctattcacatgggcgtgaaggccgaggttctgcctcatggtaccgaatgccac
cacctagtactcgaggatgagtggttgaagctggaggagccgtatcaaaccatctttttg
agcattccaaccgttctagatacctcccttgcgccgcctgggcgccatatccttcacatt
tttacaacggcatggattgacgactggcagggcttgtctccggctgattatgaagcgaag
aaggaggcagtcgctgacaagattgtgagcagattagaggccactctatttccgggtctc
aaggatgctacgacgtttcgtgaggttggcactccgaaaacacatcggcggtatttggcg
agggatgacggtacttatgggcccattccagctgggaagcccaagggattgcttggtatg
cctttcaacaccacggctgtagagggactgtactgcgtaggcgacagttgcttcccaggt
cagggtgtcattgctgtcgcgttctccggcactatgtgtgctcatcgtgttgctgcagat
cttggttttgagaagaggaatgccgtcctggacaagggactgagctctctcttagcctgg
ttccggacgttagcgtag
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