Physcomitrium patens (spreading earthmoss): 112276440
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Entry
112276440 CDS
T01041
Name
(RefSeq) lariat debranching enzyme-like
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112276440
03009 Ribosome biogenesis [BR:
ppp03009
]
112276440
Spliceosome [BR:
ppp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112276440
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
90S particles
RNase
112276440
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-GeneID:
112276440
NCBI-ProteinID:
XP_024363526
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Position
24:complement(13018437..13022007)
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AA seq
433 aa
AA seq
DB search
MKIAVEGCVHGHLDDIYATLQHLERVENVKIDLLICCGDFQAIRNEDDMESLACPPKYRS
MNSFWKYYAGVERAPYPTIFVGGNHEASNYLWDLYYGGFVAPNIYFLGFAGVVKFGGVRI
AGLSGIYKEGDYRKGHFERYPYDPSDLRSVYHVREYDVNKLLQLQGAIDVFVSHDWPRGV
VKHAPQRDVEQLLRHKPFFRKEVEQDILGSTPGKELLHKLKPEYWFSAHLHTKFAAVIHH
PNKKATKFLALDKCLPRRNFLQVFDVADTDSPLEFTYDDDWLAITRAHHPQMPLSRRPVQ
WYHVELEPHRVWVRKRLAEKGSTIPTKFIQTAPPYEPNKPGGRVGKSSGHQRNPQTVAFL
ELLDLPYLLDSEPQSTPWQQQALSQAAADPDEIPLDDEDAEEKAVVPDDIDELEASRDPD
EIELPDDENEASL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcggtggagggttgcgtccatggtcaccttgatgatatctacgccactttg
cagcacttagagagagtggagaatgtgaaaatcgaccttctcatatgctgcggcgatttt
caggcaattagaaatgaggatgatatggaatctcttgcttgtcctccgaagtaccgcagt
atgaacagcttttggaagtattatgcgggagtcgagcgcgcaccctatcccaccatcttt
gtaggtggaaatcacgaagcatccaattatttgtgggatctgtattatggtggatttgtg
gcacccaacatctattttttaggctttgctggcgttgtgaagtttggcggcgtaagaata
gcgggattgtcggggatttataaggagggtgactatcgcaaaggccactttgagcgttat
ccgtatgatcctagtgacctccggtcagtttatcacgtgagggagtacgacgttaacaag
cttttgcaactgcaaggagcaattgatgtttttgtttcgcatgattggcctcgaggcgta
gtgaaacatgctcctcaacgagatgtggagcaacttctcagacataaacctttctttcga
aaagaggtagaacaagatattctaggaagtactccaggcaaggagctgcttcataagcta
aagcctgaatactggttttcggctcatttgcacacaaaatttgctgctgtgatccaccat
cctaataaaaaagcgacgaagtttttagccctcgacaagtgtcttcctcgtcgtaatttt
ttgcaggtattcgacgtagcagatacggatagccctcttgagtttacttacgatgatgac
tggctggctatcactcgggcacatcaccctcagatgcccttaagtcgaaggcctgttcaa
tggtatcatgtggaattagagccacatagggtgtgggttcggaagcgacttgctgagaaa
ggatcaaccattcccacaaaattcatccagactgcaccaccgtatgaaccaaataagcct
ggtggtagagttggtaaatcctcaggtcatcaacggaatccacaaaccgtggcattttta
gagctattggacttgccttatttgttagattcagaaccacagtcaactccatggcaacaa
caagctctctctcaagctgcagctgaccctgatgagattcctctggatgacgaagatgct
gaagaaaaagcggttgtacctgatgatattgatgaactagaggcttcaagagacccagat
gaaatagagttacctgatgatgaaaatgaagccagtttgtag
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