Physcomitrium patens (spreading earthmoss): 112276445
Help
Entry
112276445 CDS
T01041
Name
(RefSeq) pre-mRNA-processing factor 39-1 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112276445
Spliceosome [BR:
ppp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112276445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
HAT_Syf1_CNRKL1_C
TPR_16
Motif
Other DBs
NCBI-GeneID:
112276445
NCBI-ProteinID:
XP_024363811
UniProt:
A0A2K1L9B4
LinkDB
All DBs
Position
1:17104373..17110704
Genome browser
AA seq
773 aa
AA seq
DB search
MGDQAETSVAALAPVDEVMHEAATGEVKDVFAAVEGNANGHVADVMEAEVVEQAPEVAVP
VVDHEALTPEEERLWNILKENDADFNNWTVLIQESEKLEVISKIEKAYDAFLAQFPLCYG
YWKKYADNEAKLGSSEKVVDVYERAVKAVTYSVDMWMNYCIYAMEKFEDPEAIRGLFERG
VSFVGTDYLSHLLWDKYLEFEHARSEWSRVAQIYTRILQIPLQQLDRYHTSFKHFAYSHA
LTELMTAEESETAAKLKADEPVKEAPPTDGEEPIAVADADGPAEPAKPVEAKVDSAAADD
LEKYIAVREEFYRASKEWDAKTRDFEAAIRRPYFHVRPLDEAQLGNWHKYLDFVEKEGGV
DKTIKLYERCLIACANYPEYWVRYVQRMDEEGKTEIALDALHRATVTFVKRRPEIHLFAA
RYREQQGDVKGARASYEVLRNDLGLGLLEAIIKHANFEKRQGNDEAACSIFESASELEKI
KEDSRARAVLYIQYARFLDQVLKSTEKAREVYSTALGSLPTSKTLWEAFINFEASHQPEK
PQVEYVNSLIEKAIAPSKLEGSSALSASDREELSSIYLEFVDSFGTKEDIKKAEARHREH
FPSPKSPVESKKRPSMDISAPDRAKVHKPYVGVTATAGPAGPPAYNNGQAQWNAFTPQPA
YSQQPQGWQQPPLQQLTPPVQPQQWNQSYGSHQSAYAGYGGYASYGPPQQQAPAPQQPPY
GGYGQGYPTQEVVQPYPHAPTGYTQDTSYRMPTPSTAPPAQPASTGYYYGNCY
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcaggcggagacaagtgttgctgcgcttgcccctgttgacgaggtgatgcac
gaagccgcgactggagaggtgaaggatgttttcgctgccgtcgaggggaatgctaacggc
catgttgctgatgtgatggaggccgaggtggtggaacaggcgcccgaagttgcggtacct
gtcgtggatcatgaagctcttaccccagaagaggaacgattgtggaatatcctcaaggag
aatgatgcagactttaataactggaccgtgctgattcaagaatccgagaaattggaggtg
atttcgaaaattgaaaaagcatacgatgcttttctggcccagtttcctctttgttacgga
tattggaagaaatacgccgacaacgaagcaaagttggggtcatctgagaaagttgtggat
gtttatgagcgagctgtgaaggcagtgacctattccgtggatatgtggatgaactactgc
atctatgcgatggagaaatttgaagaccctgaagctatccgtgggttgttcgagagggga
gtgtcgtttgtggggacggactatctttcgcacctcctttgggataagtatttggagttc
gagcacgcgcgctcggagtggagtcgtgttgcacagatctacacccgaatcttgcagatt
cctcttcaacagcttgaccgatatcacacaagtttcaagcactttgcctatagccatgcg
ttgaccgaattgatgacggctgaggagtctgagacagctgcgaagctcaaggcagatgag
ccagttaaagaagctccacctacagatggtgaagaacctatcgctgtggccgatgctgat
ggcccagctgagcctgcgaagccagtagaggcaaaagtagattcagcggcagctgatgat
ttagagaaatacatcgctgttcgggaagagttttaccgagcttccaaagaatgggatgcg
aagactagggactttgaagctgcgatccgcaggccgtactttcatgtcagaccattggac
gaggcacagcttggaaactggcacaagtatctggattttgtcgaaaaggaaggtggagtt
gacaagaccatcaagttgtacgaacggtgcttgatagcgtgcgcaaactatcccgagtat
tgggttcgttatgtccagcgcatggatgaagaagggaaaacagagatcgcccttgatgct
ctccatcgagctactgtgacctttgtcaagcgacgaccagaaattcacctctttgcagca
cggtatagagagcagcaaggggatgtcaagggtgcgcgcgcttcttacgaggttttaagg
aatgatcttggactaggtcttctagaggctatcattaagcatgccaattttgagaaacgc
cagggtaatgacgaagctgcgtgttctatttttgaatctgcttcagagcttgaaaaaatt
aaggaggattcccgagcacgagcagttttatacatccagtacgctcggtttcttgatcag
gtgctcaaaagtacagagaaagcccgtgaagtgtacagcacagccttgggtagtctgcca
acgtccaaaacgttgtgggaggcatttattaactttgaggcttctcatcaacctgaaaag
cctcaagtcgagtatgttaattctctgatcgagaaagcaattgctccatccaaacttgaa
gggtcgtctgctttgtcagcatctgaccgagaggaattatcgagcatttaccttgagttt
gtcgacagctttggcactaaagaagacatcaagaaggccgaagctcggcatagagaacac
tttccctctcccaagagtcctgtggaatctaagaagagaccatccatggatatttctgcg
cctgatcgtgcgaaagtgcataagccttatgttggcgtaaccgctacagcagggcctgct
gggccccctgcctacaacaacgggcaagcacagtggaatgcgttcactcctcaacctgca
tattctcagcagccccaaggttggcagcaacctcctctgcagcagctgactccaccagtg
cagccacagcaatggaatcaaagctacggttcacaccagagtgcgtatgctgggtacgga
gggtatgcttcgtatggacctccacaacagcaagcacctgcgccacagcagcccccttac
ggtggatatggccaaggatatcccactcaggaggtggttcaaccttatcctcatgcacct
actgggtatactcaagatacatcatacaggatgcctacgccctctacggctcctccagcg
caaccagcatcgacaggatattactacggaaactgctattga
DBGET
integrated database retrieval system
