Physcomitrium patens (spreading earthmoss): 112276550
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Entry
112276550 CDS
T01041
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112276550
03015 mRNA surveillance pathway
112276550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112276550
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112276550
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112276550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Motif
Other DBs
NCBI-GeneID:
112276550
NCBI-ProteinID:
XP_073387049
LinkDB
All DBs
Position
24:complement(9267542..9270182)
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AA seq
280 aa
AA seq
DB search
MLKTTIYMMPATVVITNSIRGLTNELQIQTQFIRELGCVHDTDFEGKTTPFDSIDLKIDA
PQLLLLFPKQDLVNQCKDKLSRNKKFVPATLCLAGPSPPSERIKAQVVIGTPGCMKRLIS
AHKAVHTTHIKTVVFAEADHIFAKDEYVDDSLRLMKYVKKKQSSEFEETPEFQALLLAST
SNHKVDSFISKAIPERTNRFISDHAQLLAVSAWEYHIVFSDASAQIDSCKEVMKDRFSRD
THGDGRPLKMKLVEDVWSIVHVSHLSYQELWKFQGRVTNS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagacaaccatctacatgatgcctgcaacagtggtgatcacaaactcaatccgg
ggtttaacaaacgagcttcagatacaaacgcagtttatcagagagttaggctgcgtccac
gacacagattttgaggggaagacgaccccttttgattcgatcgatctgaagattgatgca
ccccagcttctgcttttgtttccaaagcaagacctcgttaatcagtgcaaagataaattg
agtcgaaacaaaaagttcgtgccagcaacgttatgtctcgccggaccgtccccacccagt
gagagaatcaaagctcaagtcgttattggcacgcccggttgcatgaagcgcttgatatcg
gcgcacaaagctgtgcacacaacacatatcaagactgtagtctttgctgaagccgatcac
atttttgctaaggatgaatatgtggacgattcattaagacttatgaagtacgttaagaaa
aagcaaagcagtgaattcgaggagacaccagaattccaagcattgttactcgcatcaact
tccaaccataaagtagactctttcatatcgaaggctattcctgaaaggaccaaccgtttc
atttctgaccacgcccagcttttagctgtctcagcctgggagtatcacatcgtgttctct
gatgctagcgcacagatcgattcctgcaaggaggtcatgaaggaccgttttagtcgggat
acacatggcgatggtaggccgctgaagatgaagcttgttgaagatgtgtggtcaatcgtt
catgtgtcgcatttatcttaccaggagctgtggaaattccaggggagagttacaaacagt
tag
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