Physcomitrium patens (spreading earthmoss): 112276618
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Entry
112276618 CDS
T01041
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppp03036
]
112276618
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
112276618
REST complex
112276618
Heterochromatin formation proteins
Other heterochromatin formation proteins
112276618
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
112276618
NCBI-ProteinID:
XP_073386930
LinkDB
All DBs
Position
24:10651020..10657291
Genome browser
AA seq
996 aa
AA seq
DB search
MEGFTEFLTHCENVEGYLAGVFSGRKLGDFAEGAPAKDVKTERDGERERNREKEKERERQ
RDAKERERDVKPSQAAKEGGHKVVSSKDKYINKPISELDLSNCDRCTPSYRLLPKHYPRP
VSSHRTALGNSVLNDSWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLEGTAV
TAKLVGDYITKQEEQNGKAEALPPVDEFLSAINLRCIERIYGDHGLDMLEAVRKNTSRAM
PVIHSRLVQKEEEWTRCREEMNKVWSEVYAKNCYKALDHRSFYFRSQDKKALSTKGLLAE
IKEVSEKRRREDDTMLAITAGNRRPLMPDLRYEFSELSIHDDMYQIIKYSSEEISSSPDH
TEKTMRMWRMFVEPVLGLSSRSQGVEDVEEGVKVKSLEGEGRDGVGGESGDSGGDVRSSL
EGGDTGLEREGTVGRGAEVVGVEGSEGRVMAFTTNAAASGGERSVGGSLVVENARAEADD
RGCDEVREGMAVEGGEGTAARTEGSGWLHGGSNGAKLSSGPTERREVGARANAGLGENRG
SRLVADGGGSVTNGNGTGGGRTVDREEGELSPCSEQEERKKPKYSSRRGGEENGAVKLFG
GEEEDAEGVGGREMEHEQDDEGEESAQKSSSGSDTPSEAGEEVSASEQSGDEQSEHEEEE
EEEQEGKAESEGEAEGMTDVDDGDGDGNSSLADSEHSYAHCKPLAAYPGSGAGLAGVSNS
RKCGRIFYGNDTFYVLFRLYQTLYERLLSAKVNAELAAKKKGGDGGSPPNLYSRFMQVLY
GLLDGSVDNSKFEDECRAIIGTQSYILFTLDKLIFKLVKQLQAAATDDVVQKLLALNAYE
NEREVVDAVYYADACVVLHDENIYRFEQRSNPSELLVQLMEHSEAPGNSLESSFQKYLDG
FLTSIPSSKRGQVFCVRNLKRMRVEDGEDYGSDVNILNGLEIKMSCRTSKVSYVLDTEDV
FWRSVPGGKRRKVTAESKRRGQFHKWMQEMEGVRGA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggagggattcaccgagttcctgacgcactgcgagaatgtggaagggtacctggcagga
gttttcagcgggcgcaagctaggggattttgcggagggtgcaccggcgaaggacgtgaag
actgagagggatggcgagcgggagaggaaccgggagaaggagaaggagagggagagacag
cgggacgcgaaggagagggagcgggatgtgaagccatctcaggcagcgaaggaggggggt
cacaaggtggtgtcgagcaaggacaagtacatcaacaagccaatatctgagctagatttg
tcgaattgcgatcggtgcactcctagctaccggctgctgccgaagcattatcctcggcct
gtgtcgagccatcgcacggcattggggaactcggtgctgaatgacagctgggtatcggtg
acgtcagggagcgaggactactcgttcaagcacatgcggaagaaccagtacgaggagagc
ctgttccggtgcgaggacgatcggttcgaattggacatgctgctggaggggacggctgta
acggcgaagctggtgggagactacattacgaagcaagaggagcagaacgggaaagcggag
gcattgccgccggtggacgaatttttgtcagcgattaatttgaggtgcatcgagcggata
tacggggaccatggactggacatgctggaggcggttcgtaagaacacgagtcgagcgatg
cccgtgatacattcgcgtctggtacagaaggaggaagagtggacccgatgccgggaggag
atgaacaaggtgtggtcggaggtgtacgcgaagaactgctacaaggccctagaccaccgc
agcttctacttcaggtcgcaggacaagaaggcgctgagcacgaaagggctgctggcagag
ataaaggaggtgagcgagaagaggaggagagaagacgacacgatgctggcgataacagcc
ggaaatcggcggcctctgatgccggatctgcggtatgagtttagcgaactgtcgatccat
gacgacatgtaccagatcataaagtactcgtctgaggagatcagcagctcgccggaccac
acagagaagacaatgcggatgtggaggatgttcgtagagccagtgctgggcctatcgtcg
cgttcgcagggggtggaagacgtggaggaaggggtgaaggtgaagtcgttggagggcgaa
ggcagggacggggtcggtggagagagcggtgacagcggaggggatgtgaggagcagtctt
gaaggtggggacacgggtttggagagagaaggcactgtgggcagaggtgcggaggtggtg
ggcgtggaggggtccgagggtcgggtgatggcattcacgacgaatgcagcagcgagtggc
ggagagcgaagcgtgggaggtagtttggttgtggagaatgcacgagcagaagcggatgat
cggggatgtgacgaagtaagggaaggtatggcagtggagggtggggaggggacagctgcg
cgaacggaagggtcggggtggttacacggtggaagcaacggggcgaagctgagcagtggg
ccaacggaacgacgcgaagtgggagcgcgggcaaatgcgggtcttggcgagaacaggggt
agcagattggtggcggacggcggcggttcggtgacgaacggcaatggcactggcggtggt
cggacggtggatagagaagaaggagagttatcgccttgttcggagcaggaggagcgaaag
aagccgaagtacagttcgcgtcggggaggggaagaaaatggtgcagtgaagttattcggt
ggtgaagaggaggatgcagagggcgtgggtgggagagagatggaacacgaacaagacgac
gaaggggaggaaagcgctcagaagtcgagctcaggcagcgacactccgtcggaagctggg
gaagaggtttcggcaagcgagcagtctggggacgagcagtcggagcatgaggaggaagag
gaagaggagcaggaagggaaggctgagagcgaaggggaggcagagggtatgacagatgtg
gacgatggagacggggatgggaactcatcactggcagattcggaacactcgtatgcacac
tgcaagccgctggcagcttatcccgggtccggtgcaggcttggcgggggtgtcgaactcg
aggaaatgcggaaggatattttatgggaacgacacgttttacgttctcttcaggctgtac
caaacactgtacgagcgtcttctgtcggcgaaggtgaatgcagagctggcagctaagaag
aagggtggcgatggcggcagtcctccgaacttgtattcccggttcatgcaggtgctgtat
gggttgctggacggttccgtggacaattcgaagttcgaagacgagtgcagggcaatcata
ggtacgcaatcgtacatactatttacgctggacaagctgattttcaagctggtgaagcaa
ctgcaagcggcagcgacggacgacgtggtgcagaagctgctggctctgaatgcgtacgag
aacgagcgggaagtcgtggacgcggtgtactacgctgatgcttgcgtggtgctgcacgat
gagaacatataccgttttgaacaacggtcgaacccaagcgagttgctggtgcagctgatg
gagcattccgaggctcccggaaacagtttggagagctcatttcaaaagtacttggatggg
tttttgacgtccataccctcgagcaagcgcgggcaggtattttgtgtgcgaaatctaaag
cgaatgcgtgttgaagacggtgaggattacgggagcgatgtgaacatactgaacgggtta
gagataaagatgtcatgtcggacgtcaaaagtatcttacgtgctggacacggaagatgta
ttttggaggtctgtgcctgggggcaagagacgaaaggtgacggcggagtcgaagaggagg
ggtcaatttcacaagtggatgcaagaaatggagggtgtgaggggtgcataa
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