Physcomitrium patens (spreading earthmoss): 112276655
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Entry
112276655 CDS
T01041
Name
(RefSeq) endoribonuclease Dicer homolog 1 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppp03036
]
112276655
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112276655
microRNA pathway
RISC loading complex
112276655
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Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
PAZ
Motif
Other DBs
NCBI-GeneID:
112276655
NCBI-ProteinID:
XP_024363914
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Position
24:6633763..6640633
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AA seq
823 aa
AA seq
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MPAVGISRTAYVSADHIRASFSAFPERGCRRSMREFKQVIRYFSILSSYLKSMVMDSRHV
RYKRVIPKEFRLPFTSEDGSAGWTCFTYTIRFLNFKAGTDPIQQSASEFLLLSPQLLDEE
VSSISVHLNLPAFAAVDSKLNYCGVLNVSPEKVETVKKFNIWLFHLAMGKCFALPKVSGE
GKKNYYVLPCKPITGDTVPSPEELVDWHVVEIAITSSLLYRRKVPFFGGYATLDCQNTQS
NEALDGGGLRMRNGIFQEHDLEDAVVTCANNGLPCFVSGILHDLSGSSFCSQSAGRKQIS
YSDYYFHECKYKLEYPDQPLLKGYRLVRAGNYVRRTSAVSNGDSVKPWETMELPPEVCIL
HVGLKGKLCRGGMRLPSILHSLEMSLVAAELRNNIGSPLSCFKVQEALTSGACEGNHSYE
TLELLGDSVLNFIGGVHMYIDFPSCTSELLHSYRHDLVSNRNLYKCGLACGLPGYIFAEL
LNTKTWVPPGPALEDLPQKSPDGQVIGLKTLADVVEALIGVTFLHGDLNSAVKTMVWLQV
PIPFPEKIPEVIIADIQELMEARNTFKDHDIVTLEKKIGYQFKCKSLLLSAFDYGDEVTF
TQSGVPRGSFQFQRLEFLGDSVLDFLIMRHFVQLYSAFNPEQLNDLRQATVNSENFACTA
IRHGFHHYLKRMSPILRDEIELYAASVHREGGSPFGIPSRASPKAIGDLMQTLAGSILLD
SNFDHDLVWKVLKPLLSPLATPKTVMRHPRRLLEALCHKQDLKLELQTIQLEGAVEARVY
INQICVANSKHYEPTVARRLAAFTAFRSLSPKRNGLMYLDSVD
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgttggaatttctcgcaccgcttatgtttctgcagatcacattcgagcctcg
ttctctgcctttccggaacggggatgccggaggtcgatgcgggagtttaaacaagtaatt
cggtatttctcaattctatccagctatctgaagagtatggtcatggattctagacacgtt
cgctacaagcgtgtaataccgaaggagttccgtctgccattcacttcggaggacggttct
gcaggatggacatgctttacatatactattcgatttctaaatttcaaggcaggaacggat
ccaatacagcagtcagcctccgaatttctacttttatctccccaactgcttgacgaagag
gtgtcgagtattagtgtgcatcttaatcttccagccttcgctgcagtggactccaagtta
aactactgcggagtgttaaatgttagccctgagaaagtggagactgtgaagaagtttaac
atctggttatttcatttagcaatgggaaagtgcttcgccttaccgaaagtgtccggcgaa
ggaaaaaagaattactatgttttaccttgcaagcctatcacaggtgacacggttccaagc
ccagaagagctggttgattggcatgtcgtggagatagcgattacttcgagcttactgtac
agaagaaaagtaccttttttcggaggatacgctactctagactgtcaaaatactcaaagt
aacgaagcactcgatggtggtgggctgaggatgcggaacggcatatttcaggagcatgac
ctcgaggatgcagttgttacatgtgctaacaatggtttaccttgcttcgtttctggtatc
ttgcacgatctttcgggcagcagtttttgttctcaatctgccggacgcaaacagatcagc
tattcggattactactttcatgagtgcaaatacaaactagaataccccgaccagcctctc
cttaaaggatatcgactggtacgagctggcaactacgtacggcgaacatctgcagtatca
aatggtgattcggtgaagccatgggaaacaatggagcttccgcctgaagtttgcatactg
catgtggggctaaaagggaagctttgcagggggggtatgcgtcttccatctatacttcac
agtttagaaatgtcactggtggctgcggagcttcgaaacaacataggttcccctctgtcc
tgttttaaggtccaggaagcattgacatcgggggcatgtgaagggaaccactcatacgag
actctggaacttttgggggacagtgttctcaattttattggaggcgtccacatgtacatt
gatttcccttcttgtaccagcgagttgcttcattcataccgtcatgatttagtcagtaac
aggaatttgtacaagtgtggacttgcttgtggacttcctggatacatctttgctgaactg
ctaaataccaagacgtgggtgccaccgggtccagctctggaagacctccctcaaaaatcg
cctgatgggcaagtcattggactcaaaacccttgcggatgtcgttgaggccctgataggg
gttacgtttttacatggagacttaaactctgcagtgaagacaatggtttggctgcaagtg
ccaattccttttcctgaaaaaattcctgaagtgattattgctgacatacaggagctaatg
gaagctaggaatactttcaaagatcatgacatagtaacacttgagaaaaaaattggttac
cagtttaaatgcaaaagtcttttgctatcagcttttgattatggtgacgaagtcaccttc
acacagagcggtgtaccaagaggaagttttcagtttcagaggctagaattcctaggagat
tccgttcttgatttcttgattatgcggcactttgtgcagctttactctgcatttaatccg
gagcagctgaatgatttgcgacaggcaactgtgaacagtgaaaactttgcatgcactgcg
attcgtcacggatttcatcattacttaaagaggatgtcccctatattacgggacgaaatt
gaattgtacgcagcttcagttcatagggaaggtggcagcccttttggtataccaagtcga
gcatctcccaaagctattggggatttgatgcagaccttggctggttctatactactcgac
tcaaattttgatcatgacctcgtctggaaggtacttaaaccattgcttagtcccctcgcc
acacctaagacagtgatgcgacatccacgacgcctgttagaggcattgtgccacaagcaa
gacctcaagctggagttgcaaactattcagctggaaggagctgtggaagctagggtttat
ataaaccaaatttgtgttgccaactctaagcattatgaacctactgttgcaagacggctt
gccgcattcacggcttttcgatcattgtcaccaaagagaaatggtcttatgtatctcgac
tctgtggactaa
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