Physcomitrium patens (spreading earthmoss): 112276727
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Entry
112276727 CDS
T01041
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2 isoform X1
KO
K03255
protein TIF31
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppp03012
]
112276727
Translation factors [BR:
ppp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112276727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
TPR_2
CLU
TPR_9
TPR_16
TPR_MalT
TPR_8
PAM2
SKA1
Motif
Other DBs
NCBI-GeneID:
112276727
NCBI-ProteinID:
XP_024364116
UniProt:
A0A7I4CPT5
LinkDB
All DBs
Position
24:4475808..4485336
Genome browser
AA seq
1830 aa
AA seq
DB search
MSWESLWEPVCTHYHFGTRGCVCISPRCRMVLPAVLDFQIVLPDENQVTLKAISTDRLLD
VRRLLAVNVETCHLTNYSFTHEVRGDKLRDSFEVTALKPCVLTIVEEDYTFDSAVAHVRR
LLDIVACTHFFGPSQQSKLKNNQTQSKDGAEEQDNSTSSAEADESAASEGVSEAGKAANG
VLVEIDENAASARLNREKLILKGKPEAMAAMAAAKEATERGDMAGMCPPSKLGQFYEFFS
FSHITPPIQFIRRSSRSSSENNLGTNFLVLDVRLCNGKLVTVAVNEKGFSSCTKQLYHDH
SLVVLLRSLSKAFSKAYDDLMRALLERNRFGNLPYGFRSNTWVVPPVAADAPSEFPLLPT
EDSAWGGNGGGRGKNELSCVRNWAQDFTTLATMPCSTPEEREIRDRKAFLLHSNFVDRAV
TEATNIIEQHYDGGLQDEVFSEERGYIKFSLRRDVSDTIKKTELKIGSNQFPELGEADLA
KRNLLKGVTANESTTIHDTASLVLVFVRHRGYIVLAEAAGPVQEGEENASTDVDVDDLPD
GGANALNVNSLRTLLHCKVKGSARTAADAEQIQNARDLVTSILQKSMTTLESEEDRNPSS
MRWELGACWVQHLQSEAAILKERKQSTAKESKGGDSKTTVKSASAPPEQSQSAEDSAQKA
GNAVPELSVPAELLKHIPPCARARLNESAALLACKSLEELMDGARHYYEDVALPKLVADF
GSLELSPVDGRTLTDFMHTRGLQMRSLGRVAELAVKLPHVQALCVHEMVVRAYKHVLQAL
VAATKSTSDLSANIAEALNFMLGSASEDRTSAVSQWVKIFVSKRFGWKLDQSQANADIRK
YAVLRGLCHKVGIEVAPRDYAFDCATPFKKADIISMVPVYKQVACSSADGRTLLESSKAA
LDKGKLDDAVAYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALD
INERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLICGPSHPNTAATYI
NVAMMEEGLGNIHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQH
EQTTLQILQTKLGSDDLRTQDAAAWLEYFDSKALEQQEAARMGMPKPDASIASKGHLSVS
DLLEYINEAEQKDKDALKRKARKAKLQGKEPGAPTGLDSASQIVTSDEGSIESDVPVTAV
DIEPTADAKKSVSLEVDLDRGQIVPSPSPANDAEALRVDRLITLDDEEGWQEAVPRARSV
ANKRRPVHGYSGQDSSHKGLSSYHRSRGAGNAGGGDYSRAGRSSGPKANNYSNENLQVHT
GVTGNSEKPSSKEMSGPVRRTPAAPSQVVPSTKIAPVVDTAPVVLEPNTEKKETEGENHE
AVVSQLPVRQSSIKFSKVVPGKGSFSYKEVALTSPGSMLQLRSALEASAVSDASPQTDVA
QPGSSETKSIEATSVDASSAEASLVESTAEEDVDNKDDVPEMITSSAPSIPSSAEAEVEP
EERIIEAVEPSPPAQSFDTSPQDSSELSVKSVSETPDGDEQLEYKTVEAIEAQKTVPATN
PTESCSEETTDILDRNDVASPGSDDDSPAAAAKRLSAAAPPFNPNDVITSKPLLQARAVA
VTPFKDGRSPPVGGLCPQTAVPPVHVQATVAVTPICKVPHPTLAPLPLYYADPLPHMGIM
HGMIPHFMPHFLPNAPLDEAHSPLRKVPSPTPTRPKKMNPDAEEFIPSYLRDPSVLPIHS
LVTSAENLLAIDQVERLDSTPSIEAAVGSTTTGDVNANEVEVAVRSDGVDANQPIQVLDV
DDRSVVDSLPSYTETECGTPDVEVKCVTVQ
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgggaaagcttgtgggaacctgtgtgcacgcattatcattttgggacccgcggt
tgtgtgtgtatctctccccggtgccgaatggttcttccagctgtattggactttcagata
gtgcttcctgatgaaaatcaagtcacattgaaggcaatctcgacagatcgccttcttgat
gtacgacggttgctcgcagtgaacgtagaaacctgccaccttactaattattctttcacg
catgaggtccgaggagataaattgcgagactcatttgaggtcaccgcactaaagccatgt
gttctcaccattgtcgaagaggactatacatttgactcggctgtggctcatgttaggagg
cttttagatattgttgcatgtacgcacttttttgggccttcgcaacaatcgaaattgaag
aataatcagacccaatctaaggatggggcagaggagcaggacaatagcacctcgagtgcg
gaagcagacgaatccgctgcttctgagggcgtctcggaggctggcaaggctgccaacggt
gttctggttgagattgatgagaatgccgcttctgccaggttgaatcgggaaaagctcatt
ttgaaaggaaagcccgaggccatggcggctatggcagcagccaaggaggccacggaaagg
ggtgacatggctggaatgtgccctccttcgaagcttggccaattttatgaattcttctcc
ttttctcacatcacgcccccaattcaatttattcggcgatcgtcaagaagttcatcggaa
aacaaccttggaaccaatttcctcgtcctcgacgtgagactttgcaatgggaagcttgta
actgtagcagttaatgagaaaggtttctctagctgcactaagcagctctatcatgaccat
tcactggttgtgcttctccggagtctcagcaaagcgttttcgaaggcttatgatgacctt
atgagagcacttctggaacgtaataggtttggcaatcttccttatggcttccgatccaac
acatgggtagttcctccagtggcagccgatgccccttcggagtttcctctgctccccact
gaagatagtgcctggggtggtaatggaggaggtagagggaagaatgaattaagttgtgta
cgtaattgggcacaagactttactactcttgccacgatgccttgctctacaccggaggaa
cgtgagattagagaccggaaggcgtttctcttgcatagtaattttgttgatcgtgcggtg
actgaggcgaccaacattattgagcaacactacgacggtggcctgcaagatgaagtattc
tctgaagagagagggtacattaaattttcactacgaagagatgtttcggatacaattaag
aagacagagttgaagattggatctaatcaatttccggaattgggagaggcggatttagct
aagagaaatctgttgaagggagttactgcaaacgaaagcaccactatccatgacactgca
tccttggtgcttgtgttcgttcgccaccggggatatattgtactggctgaagctgcaggg
cctgttcaggaaggtgaagagaatgcatccactgacgtagatgttgacgatctgcctgat
ggtggggcgaacgcattaaatgttaacagccttcgcactcttttgcactgcaaagtgaaa
ggcagtgcgcgtacggctgcagacgctgagcagatccaaaacgcacgggaccttgttacc
tcaatacttcagaagagcatgaccactctggagagcgaagaagaccgaaatccatcatcc
atgcgatgggagcttggtgcttgctgggtgcaacacctgcagtcagaggcagcaattttg
aaggagaggaagcagtcgactgctaaagagagtaagggaggcgatagcaagaccactgtt
aagtctgcaagtgcaccaccagagcaatctcagagtgcagaggactctgcacagaaagcc
ggaaatgcagtgcccgagctttctgtaccagcagagttgttgaaacacatacctccttgt
gctcgagctcgtcttaacgagtcggctgcattgcttgcctgcaagtcactagaagagtta
atggacggagcccgtcactattatgaagacgtcgcgcttccaaagttggtggccgatttt
ggatcccttgagttgtctccggtggacgggcgcaccctcacggatttcatgcacactcga
ggtctacagatgcgctccttggggagagtggcggaactggctgttaaattgccacatgtc
caagctctttgtgtgcatgaaatggtggttcgtgcatacaagcatgtgttgcaggccctt
gtggccgcgacgaaatctacatctgatttgtcagcaaatattgccgaagccctaaacttc
atgcttgggtctgcgtcagaggatagaacctctgctgtttctcaatgggtgaagatattc
gtgagcaagcgctttggttggaaacttgaccaaagtcaagcgaatgcggatattcgaaag
tatgctgttcttcgaggcttgtgtcacaaggtgggaattgaagttgcgcctcgtgactac
gctttcgattgcgcaacgccttttaagaaggccgacattatcagcatggttccagtctat
aagcaggttgcctgctcttctgcagacggtaggacactgctggaatcatctaaggcagcg
cttgataaggggaaactggatgatgctgtggcttatggaacaaaggccttagcgaagttg
gtggctgtttgtggaccttatcaccgaatgactgctggtgcatatagtctattggcagta
gtgctatatcatacaggtgactttaatcaggcaacaatttatcaacagaaggcgttggac
attaatgagcgagaacttggacttgaccacccagataccatgaaaagttatggtgatctg
gcagtattttactatcgtcttcaacacaccgagttggcacttaaatatgttaatagagct
ctctacttgctacatttaatatgcggtccttctcacccaaatactgctgcgacatatatc
aatgtagccatgatggaagagggtctaggaaatatccatgtggctcttcgttatttacat
gaggctctgaagtgcaatcagcggcttctgggagctgaccacattcagactgctgcaagt
taccacgcaattgcaattgcgctttcacttatggaggcttactccctcagtgttcagcat
gagcaaactaccttacagattttgcaaactaaacttggatctgatgaccttcgaacacag
gatgcagccgcctggctagagtacttcgattctaaagcgctagaacagcaggaagctgcc
cgaatgggaatgccaaagcctgatgcgtcaattgctagcaaaggtcacctaagtgtctcg
gatcttttggaatacatcaacgaagctgagcagaaagacaaagatgccctcaagcggaag
gcgcggaaagctaagctgcagggaaaagagccaggtgcaccgacaggtcttgattcagca
tctcaaattgtgacttccgacgagggctccattgagagtgatgtcccagtgactgcagta
gatattgaacctacagcggatgcgaagaagtctgtttcactggaagttgatttggatcgt
gggcagatcgtgccttctccttcaccagccaacgatgctgaagctcttcgagttgacagg
ttaataactctagatgatgaagaaggctggcaggaagccgttcccagggctaggtccgta
gccaacaagaggagacccgttcacgggtattcaggtcaagattcatcccacaaaggctta
tctagttatcatagatctcgaggtgcaggcaatgctggtggaggggattatagccgtgct
gggagaagcagcggacctaaggcgaacaactacagcaatgaaaatttgcaggtacataca
ggtgttacaggaaactctgagaaaccttcttcgaaagagatgagtggacctgtgaggagg
acacctgcagccccctctcaagttgttccttcaactaagatagctcctgtggtagacact
gcgcctgtagtacttgaacctaacaccgagaaaaaggaaaccgagggtgaaaaccatgag
gccgtagtgtctcaacttcctgttcgccagtcttcgatcaagttttctaaggtagttcct
ggaaaaggttccttttcctacaaagaggttgctctcacttctccaggatctatgttgcaa
ctacgctcagcgttggaggcttcagctgtttcggatgcttcacctcagactgatgttgca
caacctggttcatctgaaacgaaatcgatagaggctacttctgtggatgcttcctcagca
gaggcttctttggtggagtctaccgctgaggaagacgtcgataataaggacgatgttcca
gagatgattacttcatctgctccctctattccatcatctgcagaggcggaggttgagccg
gaggaacgtattattgaagccgtcgagccttcacctcctgctcaatcatttgatacttct
cctcaggactcaagtgaacttagtgtcaaatcggtgtcagaaactccagatggagatgaa
cagcttgagtacaaaacagtcgaagccattgaagcacaaaagactgttcccgccacaaac
cctactgaaagttgttctgaagaaactacggacattttagatagaaacgatgtggcatcc
cctggaagtgatgatgattcacctgctgctgcagcgaagagactatcagccgcagctcca
cctttcaacccgaatgatgtcataacgagcaagcctttgttacaggccagagctgtcgct
gtgaccccatttaaggatggcagaagtccaccagttggtggtctttgccctcagactgcc
gttccacccgttcacgtccaggctaccgtggcagttactcccatttgcaaggtgccccat
ccaaccttggcacccctccctttgtactacgccgatccgttgccacacatgggtatcatg
catggcatgattccccacttcatgccgcattttcttccaaatgctcccttagatgaggct
cattcccctctacgtaaggttccatctcctacaccaacgcgaccgaagaagatgaatcca
gacgcagaagagttcattccatcgtacctgagagatccatccgtgctaccgattcactcc
ctggtcacctcagctgaaaatctcttggcaatcgatcaagtggaaagactggattctact
ccatccattgaagcagcagttggatccactactactggtgatgttaatgccaatgaagta
gaagttgctgtgcggtcggacggagtagatgccaaccaacctattcaagtcctggacgtg
gacgacagatccgtagtggattctttaccatcttacactgaaactgagtgcggcacaccg
gatgtggaagttaagtgcgtcacggttcaataa
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