Physcomitrium patens (spreading earthmoss): 112276827
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Entry
112276827 CDS
T01041
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00300
Lysine biosynthesis
ppp00470
D-Amino acid metabolism
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
ppp01230
Biosynthesis of amino acids
Module
ppp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
112276827
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
112276827
Enzymes [BR:
ppp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
112276827
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
112276827
NCBI-ProteinID:
XP_024364335
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Position
24:complement(4872138..4873970)
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AA seq
515 aa
AA seq
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MAAQAVPALQVRPSTSAFASNVDSRPLKTVSDVSFVRFRSSCAWSRTFLQELKLHAKQER
SRSVGHGCRAAVLDLSAVQHQKGVDQGKSLNTAFPVRDDGYMYCEEVRVQEIMDNEVEEL
RPFYLYSKKQLRRNYEAYQEALQGLNSIIGYAVKANNNLKIMQHLRELGSGAVLVSGTEL
RLAVEHADFDPARCVFNGNGKLLEELELAAQYGVLINVDSEFDLAQIIEASRITGKKVKV
LLRINPDVDPQVHPYVATGNKNSKFGIRNEKLWWFLEQVKSHPDNLELVGVHCHLGSTIT
KVDVFRDAAVVMVDFVNKIRSENFNIQYLNIGGGLGIDYYHKGAVLPTPKDLIDTVRELV
TKEGLTLIIEPGRSLVANTSVFVSNVTGVKTNGTKNFIVIDGSMSELIRPSLYDAYQHIE
FVAPPAEGAEAKTYDVVGPVCESADFLGKERQLATPKRGDVLVVHDAGAYCMAMSSTYNL
RMRAPEYWVLEDGKTVEKIRHAEQLDDHIRYFEGL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaagctgtccctgcgctccaagtgcgaccatcgacgtctgcattcgcttcg
aatgtggactctcggccgctgaaaacagtgtctgatgtgtcctttgttcgctttaggtcc
tcgtgtgcctggtctcggacatttctgcaggagctcaagcttcatgcgaagcaggagaga
tcgagaagtgtaggtcacggatgccgagccgcggtgttagatttgtctgcagtgcagcat
caaaagggagtggatcagggcaagtcgttgaatacagcgtttcctgtccgcgacgatggc
tacatgtactgcgaggaggtgcgggtgcaggagattatggacaacgaggtggaggagttg
cgaccgttttatttgtacagcaagaagcagctgcggaggaactacgaggcctaccaggag
gcgctgcaagggttgaactcgatcattggatacgctgtgaaagccaacaacaatttgaaa
atcatgcagcatttgcgggagctcggaagtggtgctgtgctcgttagtggcacagagctg
cggctcgccgtggagcacgcggatttcgatcctgccaggtgtgttttcaacgggaatggg
aagctgttggaggagttggaactcgcggcacagtatggtgtgctcattaatgtggacagt
gagttcgacttggcccaaatcatcgaggctagcagaattaccgggaagaaggttaaggtg
ttgttgcggatcaatcctgacgtcgatcctcaggtgcatccgtacgttgcgacggggaat
aaaaactctaaattcggaatccgaaatgagaagttgtggtggtttttggagcaggtgaag
tctcatcctgataatcttgagctagtaggggtacattgtcaccttggatcaaccattact
aaggtggacgtattccgagacgcggcagtagtgatggtggactttgtgaacaaaattagg
agcgagaatttcaatattcagtacttgaacataggagggggccttggcatcgattactat
cacaaaggtgccgttcttcctacaccgaaggacctcattgacacggttcgggaattggtg
acgaaagaaggtctaactctgattattgaaccggggagatcattggttgcgaatacctcg
gttttcgtgagcaatgtgactggtgtgaagacgaacgggacgaagaacttcatcgtgata
gacggtagcatgtcggaactgattagaccaagtctttatgatgcctatcaacacattgaa
tttgtagcgcctcccgctgagggagcagaggcgaaaacttacgatgtcgttgggcctgtc
tgcgagtccgcggactttttgggtaaggagcgtcaattagctacaccaaagcgtggggat
gtactcgtcgtgcacgacgccggcgcctactgcatggcaatgtcatcaacatataatttg
cggatgagagctccagaatattgggtgttggaggatggaaagactgtagagaaaattagg
catgctgagcaattggacgatcatatccgctactttgaaggcctgtga
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