Physcomitrium patens (spreading earthmoss): 112276850
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Entry
112276850 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112276850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112276850
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112276850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
DSE1_N
Utp12
Beta-prop_WDR75_1st
Beta-prop_Aladin
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ASA1
Beta-prop_EIPR1
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
PEP5_VPS11_N
PAC11
Beta-prop_WDR19_1st
TRM82_WD
Beta-prop_IP5PC_F
WDR54
Beta-prop_Nup120_160
Beta-prop_LRRK2
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_ACSF4
Beta-prop_RIG_1st
DNAI3_WD
PALB2_WD40
PROPPIN
Utp13
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
112276850
NCBI-ProteinID:
XP_024364382
UniProt:
A0A2K1IG24
LinkDB
All DBs
Position
24:6168111..6173965
Genome browser
AA seq
944 aa
AA seq
DB search
MVKAYLRYEEGAAFGLVASGEARVCFDNSGKLLLAGALEQFLVWNVKQGRCVNLLVPSAG
ARPLVTAIATAPSSASLVAVGYKDGTIRVWDIVKGTCEMVLTGHKGAVTALAYNKTGSLL
ASGSTDTDIIVWDAVAETGLYRLKGHRDQVTDLVFLERSKKLVSGCKDTHVRVWDLDTQS
CVQRIVSHRSAVWALDVDPSERFVVTGSADAEIRVFGVVNDEGAQKEVHAVVEDMEHADD
SNDGSKVGPRSKWDILVPMGSIARQSADRVSTLKFNPSGTLLGCQVAGKSIEIFRVLGES
EAAKKAKRREKRRREKAAKAGKGEATDGQGFGGEGEQEGNASSMAGNISAADEFQRLQLV
RLKQKITSFSFCPAEAKKGTLGTIGIAVYNNSLEVQELQEESSSRVHSIELPGHRSDVRM
AALSSDSTTLMTASHNAVKIWNPRSGVCLRTVESGYGLCGAVVPGNRQAILGTKAGGIEI
FDIAGAERTQVLEAHSGAVWSLAPMPDGSGFVSGSADKNVKFWDYELVQGDDKVGSKQLS
IRNTRTLQMADDVLCVRLSPDARYIAVALLDSTIKIFFTDTLKFFVSLYGHKLPVLSMDI
SSDGALLASGSGDKNVKIWGMDFGDCRKSLFAHGDSVTAVQFVPKTHYMFSAGKDGVVKY
WDADKFELLLTLEGHHAAAWCLAVSPHGDFLVTGSQDRSIRRLDRTEEPFFIEEEREKRL
ETMFEATDNTRDDGVDQGVEVGSKRTQETLSAADSIIEAVDMADSEIERLRVHKKSTNGK
EDGFQANVLMLGLSPSDYVLRSISSVRPSDLEQALLSLPFNDALKLLSYTQGWIASGSQV
ELACRVVVMLVRIHHSQLTATSSARATLTGLHPVIHGGVQKLKDVLGYNSAGMALVQSML
AMRSDAMFQDAGQKVLDIRKKLAERREESRPRKRQKKPNQAAKQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcgtatctccgctacgaggaaggtgccgccttcgggctggttgcctcgggt
gaggcgcgcgtctgcttcgacaactccggcaaattgttgctggcgggcgcgttggagcag
tttctggtgtggaatgtgaagcaggggcggtgcgtcaacctgctcgtgccttctgcggga
gcgcggcctctcgtgaccgctatcgcgaccgcgccttcgtctgcttctctggtggcggtg
ggatacaaggatggcacgattcgggtgtgggatattgtcaagggcacttgcgagatggtg
cttaccgggcacaaaggtgcggtcaccgctttggcctacaacaagacggggtctctgttg
gcgtccggaagcacggacacggacatcatcgtgtgggatgctgtggcggagactgggctg
taccgtctgaaggggcaccgtgaccaggtgacggatttggtgtttctggagaggagtaag
aagctggtgagcgggtgcaaggacacccacgttcgcgtgtgggacttggatactcagagc
tgcgtgcaaaggatagtgagtcatcggagcgcggtgtgggcgttggatgtggatccatcg
gaacgttttgtggtcaccggatcggcagatgcagaaattcgggtgtttggtgtggttaac
gacgagggagcgcagaaggaggtgcatgccgtggtggaagacatggagcacgcagatgat
tcgaacgatgggagtaaagtgggtccgaggagcaagtgggacattttggttccgatggga
agcattgctcgtcagagcgcggatcgggtgtcaaccctgaagtttaatccgagcggtacg
ctgctagggtgtcaggtggccgggaagtcgatagaaatattccgggttctgggcgagtct
gaagctgcgaagaaggctaagcgacgggagaagcgtcgtcgggagaaagccgcgaaggct
gggaaaggagaagcaacggatgggcaagggttcggtggcgagggcgagcaggaggggaat
gcgtcgagcatggcagggaacatatcagctgcagacgagttccagcgactgcaactagtg
agactgaagcagaagatcacatcgttttcgttttgtcctgcggaggcgaagaaagggacg
ttaggaacgatcgggatagcggtgtataacaacagcttggaggtgcaggagctgcaggag
gagtcgagttcgcgggtgcattcgatcgaacttccagggcatcggtcggacgttcgaatg
gcagcgctgagttcagacagcacgaccctgatgacggcaagtcacaatgcggtgaagatc
tggaatcctagatcgggtgtgtgtcttcggactgtggagtccgggtatgggctgtgcgga
gctgtggtgcctggaaatcgacaggcaattctgggtacgaaggctggagggatcgagatt
ttcgacatagctggcgcggaacgcacgcaagtgttagaagcccattcaggtgctgtgtgg
agcctggcaccgatgccggatggttcaggattcgtgagcggaagtgcggacaagaacgtg
aagttctgggactacgagcttgtgcaaggggatgataaggtgggaagcaagcagctgagc
atacgcaacactcgcacattgcaaatggcagatgacgtactgtgcgtgcggctgagtcct
gatgctagatatattgcggtggcgcttcttgattccacgataaagatattcttcacggac
acgctgaagttctttgtttcactgtacgggcacaagctaccagtgctgtcaatggacata
tcttcagatggagcactgcttgcgagtgggtcaggcgacaagaatgtgaagatatggggg
atggacttcggtgattgccggaagtctctgtttgcacatggtgacagtgtgacggcagtt
cagttcgtgccaaagacgcactacatgttcagtgccggaaaggatggagttgtgaagtac
tgggatgcggacaagtttgaactgctgctgacgttagaagggcatcatgcggcagcatgg
tgccttgctgtgagtccgcacggcgacttcttggtgactggatctcaggaccgttcgatt
cggcggttggaccgcacggaggagccgttctttatcgaggaggaaagagagaagaggctg
gaaacgatgttcgaggcaaccgacaacacacgagacgatggagttgatcagggcgtagaa
gtggggagcaaacgtactcaggaaacgctgtctgccgctgatagtatcatcgaagcagtg
gatatggcggactcggaaatcgaacgactgcgcgttcacaagaagtcgacgaatgggaaa
gaggatggatttcaagccaacgtgttgatgttggggctgtctccgtcagactacgttctg
cggtctatctcgagcgttcgaccgagcgatctggaacaagcacttctgtcgctgccattc
aacgatgctttgaagttgctgagctacacccaaggatggattgcttcgggctctcaggtg
gagcttgcgtgccgggtggtagtgatgctggttagaatccaccattcacagctgactgcg
acttcgtcggcccgcgccactttaaccgggcttcatcctgtgatacatggtggagtacag
aaattgaaggatgtcctgggatacaattcagctggaatggcgcttgtacagagcatgctt
gcaatgcggtcagatgcaatgttccaggatgcggggcaaaaggtgctggatattaggaag
aagttagcagagaggagagaagagagtagaccgaggaaacgacagaagaaacctaatcaa
gctgcgaagcagtga
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