Physcomitrium patens (spreading earthmoss): 112277038
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Entry
112277038 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K23002
RNA polymerase II-associated protein 3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112277038
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112277038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_11
TPR_9
TPR_16
Motif
Other DBs
NCBI-GeneID:
112277038
NCBI-ProteinID:
XP_024364769
UniProt:
A0A2K1IH72
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Position
24:11594392..11601451
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AA seq
634 aa
AA seq
DB search
MSYEVQKQIRDNSTELQDFLHDLTQWEHVVKEKEKKLVDSGSKIIPSVRGQKQSSLDEGS
VNYDADKKIPRKAASHTYDYFRDKWDKFDVDAALAEVDEEPQPKKSSLKKVAGLNKTKPS
NAKAKVEEKPPKSNLSVSESSIYTPSRGSSRASLGTLETLSSSYGLEDQPVPDAMSEKDL
GNEYFKERKYVKAIECYSRSIALEPTAVTFANRAMAFLKIRRYADAEADCTEAISLDDRY
TKAYSRRGTARKELQKYFPAVEDFEFALRLEPENKELKKQYNEAKGLYEKFASKGKPTQN
KVPILVEELSGTSPGMSESTELPSSKISPRATTKYLERNDPYSAKLHPSGTESGASAARR
LDERKPASPATSNIIPVATSSLNSFASSSLISGNVPVDRKDPGNNGVANSLSSASSRAAS
TIKSPATPTESVGSQGASSVNPRSSDDWAVATSKKMDASRPVDDPVPFPLSAQLAKDKVD
RKLTAEVKAPSQATVERAAMNARAGLARNMVAPKTSYEFESTWKCFANDRQSQSRLLKIM
EPSSLPKIFKDLLGAPLLMDIMGCLPLLLPEHTGLLLRILENLVKVGRFDMTILFLTSKD
KTVMRKLWEDILATEELSMNEETKLNALRSKYKL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgaagtgcagaagcagatcagggataacagcacggagctccaagacttttta
catgatcttacacagtgggagcatgttgttaaggagaaggagaaaaaacttgttgacagt
ggaagcaagataattccctctgtgcggggtcaaaagcagagctctttagacgagggtagc
gtaaactatgatgcagacaagaaaattcctagaaaagcagcaagtcatacgtacgactat
tttagagataaatgggacaaatttgacgtggacgcggcattggctgaggtggatgaggag
cctcaacccaaaaaatcatctcttaaaaaggtggcaggactcaacaaaactaagccatcc
aatgccaaggccaaagtagaagagaagcctccaaagtccaatctgagtgtatcagaaagt
agcatctacaccccaagtcgaggttcaagccgagcgtctcttggaactttggagacgtta
tcgagttcttacgggcttgaggaccaacctgtcccggatgcaatgtcagagaaagacctg
ggtaacgaatatttcaaggaaagaaaatacgtgaaagctatagaatgttattctcgaagc
attgcgttggaaccaaccgcagttacattcgccaatcgagctatggcttttctcaaaata
agaagatacgcagacgcagaagcggactgcacggaagctatttccttggatgatcgctac
accaaagcctactctcgcaggggcacagctcgcaaagagcttcaaaaatatttcccagct
gtggaagatttcgaatttgctttgcggctggagcctgaaaataaggagcttaagaagcag
tacaacgaagcaaaagggttatatgagaagtttgcatctaagggaaaacctacacaaaac
aaagtccctatattagttgaagaattgtcaggtacttctcctggtatgtctgaaagcaca
gagctgccatcatcaaagatctcacctcgagcaaccactaagtatttagaacgtaacgat
ccatactctgcaaagctccatccgagcggcacagaaagcggagccagtgcagcaagaaga
ttggatgaaagaaaacctgcatctcctgctacttcaaacataattcctgtagctacttca
agccttaacagctttgcatcttcatctctgatctcaggaaatgttcctgtcgatcgcaag
gatcctgggaacaatggtgtagcaaattctttatcatctgcatctagtcgtgcggcttct
acaatcaaatctcctgcgactccgactgaatctgttggttcacagggggcttcaagtgtg
aatccgagaagctctgatgattgggctgtggctacttctaagaagatggatgcttctcgt
ccggttgatgaccctgtaccatttccattatcagcgcaactggcaaaggacaaggtagac
agaaagttgactgccgaagttaaagcaccgtcacaagccactgtggaacgagcagctatg
aatgctagagcgggactggccaggaacatggttgcacctaagacttcctatgaatttgag
tcaacatggaaatgttttgctaatgatcgtcagtctcaatcccgccttctgaagattatg
gagccgtcttcattgccaaaaatctttaaagacttactaggagcaccgttgctgatggac
atcatgggttgcttgcccttactgctacctgagcacactgggctgctgctgcgtatattg
gaaaatctggttaaagtcggtcggttcgacatgacaatcctctttctcacatctaaggac
aaaactgttatgcggaagttgtgggaagatatattggcgactgaagaactttctatgaat
gaggagactaagcttaatgcactgcgttcaaaatacaaattatag
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