Physcomitrium patens (spreading earthmoss): 112277216
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Entry
112277216 CDS
T01041
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112277216
04121 Ubiquitin system [BR:
ppp04121
]
112277216
Transcription factors [BR:
ppp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
112277216
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
112277216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
112277216
NCBI-ProteinID:
XP_024365063
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All DBs
Position
25:666603..672973
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AA seq
1295 aa
AA seq
DB search
MASVEEQPVLSQTSNVHGARNLVHERNRGMRGSVVPRGGRGGGPSSFGRGRGRGRSSRPH
SSSGDVRVLDRQSPVDESGSHVGNVESTVQSNATELSVSDSHTHPRRGFDGRRGRRNQIF
GRGRDDGRSAIDPNFDRLYSNDFGSRMDGLELEMPLPSRQNQGYAQRQSISGDVGVERRD
QGGGSDIGSDRRGDSRRNTENRFGSRSRGRESGNSWSRVNEPPNRVDLNEQTSEGMSSMK
ASKPGQNKFLRNGQERERRIDSGRKKDVAKIDTPQLVQELEVKLATGKVECMICYDNVGR
NAPVWSCASCYSIFHMPCIRKWVRAPTSSDISVSAAGNGEANWRCPGCQTVQMSSANELQ
YYCFCGQVRDPALDYYITPHSCGGPCRKPLDKSKNGYCKHSCTLQCHPGPCPPCTALAPP
QSCPCGKTTTTRRCSEQGKDARSCGQQCGRPLPCGRHDCLQICHEGVCEPCGVLFEAKCF
CGRREEGLRCWQIEPPGKINPGGVFSCEMQCLKMLSCGNHVCGNNCHPGDCGECELSPSV
VRTCPCGKKNLADSQEPGNERLCCTDPIPTCQQICEKILACKKHPCKSLCHIGPCPDCDV
PVEQRCRCGTSTRRAACYLATGAGSRNQISESVVEGDDGGLFLCDRKCDKMRSCGRHRCN
GRCCPAANNKSMTQSDGPESRDPHLCMLPCGKKLRCKNHSCQELCHPGHCPPCMETTFNE
LSCACGRTSIPPPVPCGTPLPSCQFPCSVPQVCGHEATHLCHFGDCPPCTVAVAKECVGN
HVVLRGVPCGSRDIKCSKLCGKTRQCGLHACEQTCHLPPCDSLEAGTSSQQQSGLSCGQQ
CGAPRRHCAHTCAASCHPNSPCPEIACKFMVTISCSCGRLTAEVACGAGGSNLRGTNDIT
SMMLSRLPVPLQPVEGRDRDKIPLGQRKLQCDDECAKLEKRRLLADAFGASVPGEAVPGL
EGGVVGSDLLAEIIRRDPQWAAAVEDRFKYLVQGPKSGTWPGGSIRLHVFSAMPKERREV
IYQMAERWGLGQVGHGREPRRFVIVHVTPKSKVPMRSLLPKTPFAGVTGPVRAPPFNAQL
DMEPGLVVGLLDLPREADVSTLVLRFGGECELVWLNDKNALAIFADAARAATALRRVDHA
SEYRGATTMPADASSSARGGAWGMQTSLPTGSKAAAFRKGIQESNWVEDAWDDQKGAKQE
TGAWQSKVRPLSASQNPWSALSNNNSVLSNGLSEGSTSGIGSSVPSRSSIADSSAASARI
GNQVGAFSQQGSLAGPSLLPALLPDGDDDDWEKAV
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggtggaagagcagcctgtattatcgcaaacgagtaacgtgcatggagctaga
aatttggttcatgagcgtaaccgagggatgcgaggttccgtagttcccagaggaggtcgg
ggaggaggcccgtcttcctttggcaggggcaggggaagaggaaggtctagcagaccgcat
tcatcctcaggtgatgttcgtgtgcttgatcgacaatctcctgttgacgaatctggaagt
cacgttggtaatgtagagtctacggtgcaatcaaatgcaacagagttgtccgtcagtgat
tcacatactcatcctcggaggggatttgacggtagaagaggcagacgaaatcaaattttt
gggagaggaagagatgatggacgcagtgcaattgatccaaattttgaccgactttactcc
aacgattttggaagtagaatggatggattagagcttgaaatgcctttaccttctagacaa
aaccaaggttatgcgcaacggcagtccatttctggcgatgtcggcgttgagcgacgagac
caaggtggagggagtgatattggatctgataggcgaggtgatagcagaagaaatactgag
aacagatttggaagccggtctagaggtcgcgagagtggcaacagttggagccgtgtcaat
gaacctcccaatagagtcgacttgaatgaacaaacttctgagggaatgtcctctatgaaa
gcgtcaaaaccaggacagaacaaattcctaagaaatgggcaagagcgagaaagaaggatt
gattcagggcgtaaaaaagatgttgcgaagattgacactcctcagctggttcaagagctt
gaagtgaagctcgcaactgggaaagtcgaatgcatgatttgctatgacaatgtgggcagg
aacgctcctgtttggtcgtgtgcaagctgttactccatcttccacatgccttgtataaga
aaatgggtacgagctcctacgtcatccgatatctcagtttctgctgctgggaatggtgaa
gcgaattggagatgcccaggctgccagactgttcaaatgtccagcgccaatgaactccag
tactattgtttctgcggacaagtgagagatcctgcattggattattacattactcctcat
agttgcggagggccttgcaggaaacctttagataagtcaaaaaatggttactgtaaacat
tcctgtaccctgcagtgtcatcccggtccttgtccaccctgcacagctcttgcacctcca
cagtcttgtccttgcggcaaaactactaccactcgacgttgctctgaacaaggaaaagat
gcgcgcagttgtggtcagcagtgtggtcgaccactaccttgcggtcgtcacgactgtctc
cagatatgtcatgaaggtgtatgtgaaccttgtggtgttctttttgaggcgaaatgtttc
tgtggacgacgtgaagagggtttgcgatgttggcaaatcgagcctccgggtaaaatcaat
ccaggaggcgtgttttcttgtgagatgcagtgcctgaagatgctttcatgtggcaatcac
gtgtgtgggaacaattgtcatccaggagactgcggggaatgtgagctatctccttcagtt
gttcgcacctgcccgtgtgggaagaaaaacctggcagattcacaagagcccgggaatgag
cggctgtgttgcaccgatcctattcccacatgtcagcagatttgcgaaaaaattctcgct
tgcaagaagcacccgtgcaagagcctatgtcatatagggccgtgtcctgattgtgatgtt
ccagtggagcagagatgtcgatgtgggacgtcaactcgaagagctgcctgctatttggca
acgggagctggatcgaggaatcagatcagtgaatctgttgtggaaggggatgacggaggt
ctatttttgtgtgacaggaaatgtgataagatgcgaagttgcggacgtcacagatgtaat
ggcaggtgctgtccagctgcgaataataaatccatgacccaatccgatggcccggaaagt
cgtgatccgcatctctgcatgttgccttgtggcaaaaagttgcgatgcaagaatcactct
tgtcaagagctttgtcatccaggacactgtccaccttgcatggagactacatttaatgaa
ttgtcttgtgcgtgcgggcgaacttctatacctccaccggttccttgtgggacaccattg
ccatcttgtcaattcccgtgctcagtacctcaggtttgcggccatgaagcaacccatctg
tgtcattttggagattgtccgccttgcacagtagctgttgcaaaagagtgtgtcggcaat
catgtagttcttcgtggagtaccctgtggctcgcgagacataaagtgcagcaaactttgt
ggtaaaacgaggcagtgtgggctgcatgcttgtgaacaaacgtgtcaccttcctccttgc
gattccttggaagccggaacttctagtcagcaacaatcaggcctttcgtgtggtcaacag
tgtggagctcctcgtagacactgcgctcacacatgcgctgcatcctgccatccgaattct
ccgtgtcctgaaattgcatgtaaattcatggtcaccatctcctgttcttgtgggcggtta
acagctgaagtagcatgtggtgctggcggatcgaacttacgtggcacaaatgacatcact
tcaatgatgttatctaggctgcctgttccgttacagccagttgaaggtagggatagagac
aaaatccctttgggacagagaaaattacaatgtgatgatgagtgtgcgaaacttgagaag
cggcggttgctggcggatgcttttggtgccagtgtaccaggtgaggcagttcctggctta
gaaggaggggtggtaggatccgacttactagctgaaattataagaagggatccacagtgg
gcagctgcggtagaggaccgttttaagtatttagtacaaggacctaaaagtgggacgtgg
ccaggaggcagcattcggttacatgtttttagtgcaatgccaaaggagcgcagggaggtg
atctatcagatggctgaacgatgggggttaggtcaggttgggcatggtcgtgaacctcgg
agatttgttattgtccacgttacacccaagtccaaggtgccgatgagatcattattacca
aaaacaccgtttgcaggtgtcactggacctgttcgtgctcctccgttcaacgctcagttg
gacatggaacctggtcttgtggtagggctccttgaccttccgcgtgaagccgatgtaagc
actcttgtactgcgctttggcggcgagtgtgagctcgtgtggttgaacgataagaatgct
ttggccatatttgcggatgctgctcgagctgctactgcacttaggagagtcgatcatgct
tcagaatacaggggagcaacaaccatgccagccgatgcaagttcttccgccaggggaggg
gcttggggaatgcagacctctcttccgacaggatctaaagctgctgcattcaggaaaggt
atacaggagtcaaattgggttgaagatgcttgggacgaccagaaaggagccaagcaagag
actggtgcctggcaatcgaaggttcgtcctctttctgcatctcagaatccttggagcgca
ctttcaaacaacaattctgttttaagtaatgggctttcagaaggaagcacatcaggcatt
ggatcatctgtgccttcaaggtcgagtattgccgacagctctgctgcatccgcgagaata
ggtaatcaagttggagcgttcagccaacaaggttctttggcaggcccttccctgctgcca
gctttgttgccagatggcgatgatgatgattgggagaaggcagtctga
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