Physcomitrium patens (spreading earthmoss): 112277376
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Entry
112277376 CDS
T01041
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112277376
Spliceosome [BR:
ppp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112277376
SSDB
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Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
112277376
NCBI-ProteinID:
XP_024365349
LinkDB
All DBs
Position
25:2319103..2325117
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AA seq
523 aa
AA seq
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MTSTAGQPQFRYTQPPSKVLHVRNLPWECSEEELIELCKPFGKVVNTKVNVGANHNQAFV
EFADLNQAIAMVSYYASSSEPAQVRGKTVYLQYSNRQEIVTSKNSGDVASNVLLVTIEGV
EAGDVSIDVLHLVFSAFGFVHKIATFEKSAGFQVCIMALVQFSDANTASAAKSALEGRSI
PRYLLPDHVGPCHLRISFSAHNDLNVKFQSHRSRDYTNPYLPVAPSAIDGSGQFSVGPDG
KRREPESNVLLVSIENMQYAVTIDVIHTVFSAFGFVQKIAIFEKSAGFQALVQYPDIPTA
VGAKEALEGHCIYDGGFCKLHLSYSRHTDLNVKVNNDRSRDYTNPGLPPTQPAVLGQAPG
IGPGSPAAAGPAYPTAPYGVTPPPQDSCAQQQAWDPEGSAKAQQVSGPMLGQPMSGSQQP
LYTSHQHGGAGGHPVHHGPAGAPGSFQGPHGAPGAVTSMGPMSGPPMGAPMGPPGHMVPG
MHQQGQPNHHMGPGHSMPPYQQMHGTGHQGMPPSNGGPGGYYM
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgcgggtcagccccagttccgctacacgcagcccccgtccaaggtgctg
cacgtgcgcaacttaccctgggagtgcagcgaggaggagctcattgagctgtgcaagccg
ttcggcaaagtggtcaacaccaaggtcaatgtcggggctaatcacaaccaagcgtttgtg
gagtttgccgatttgaatcaagctattgcgatggtatcgtactatgcttcatcttcggag
ccggctcaagtacgaggaaagacggtgtacctgcagtattctaacaggcaagaaattgtc
accagtaagaactctggggatgttgcaagcaatgtcttgctggtaacgattgagggcgta
gaagctggcgatgtcagcattgacgtgttacaccttgtgttttctgcctttggctttgtc
cataagattgcgacctttgagaaaagcgctggcttccaggtgtgtattatggcacttgta
caatttagtgatgccaatactgcctccgctgccaagtcagctcttgaaggccggagtatt
cccagatatttgctgcctgaccacgttggtccttgtcacctgcgaatctcattctctgcg
cacaatgatctcaacgtgaagttccaaagtcatcggagcagggactacacgaatccatat
cttccggtggctccatcagcaattgatggtagtggtcagtttagcgttggacctgatgga
aagaggagagagcctgaaagcaacgtgttgcttgtttcaattgaaaacatgcagtacgct
gtaacgattgatgtcatacacactgttttctcagcttttggattcgttcagaaaattgca
atttttgagaaaagtgctggttttcaagctttggttcaatacccagatattcctactgca
gttggagcaaaagaagcactcgaaggtcactgcatttacgatggcggtttctgcaagctt
catctatcatactctcggcatactgatttaaatgtaaaggtcaataacgatagaagtaga
gattacactaatcctgggcttcctccaacccagcctgctgttttgggccaagctccgggg
attggtcctggcagtcctgctgcagctggccctgcttacccaactgctccgtatggggtt
accccacctccgcaggactcgtgtgctcagcagcaggcatgggaccccgaaggaagcgct
aaagctcaacaggtttctggtccgatgctagggcagcccatgtctggttcgcaacagcct
ttgtacacgagtcatcagcatggtggagctggtgggcatcccgtccatcatggtcctgct
ggtgcaccaggctcctttcagggtcctcatggtgctcctggtgcggtgacctcaatgggg
ccaatgtcagggccaccaatgggtgctcccatgggaccacctgggcacatggtacctgga
atgcatcaacaaggccaaccgaaccatcacatgggacctggtcattccatgccaccttac
caacaaatgcacggaactggccatcagggtatgcctccttcaaacggagggcctggtggt
tactacatgtga
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