Physcomitrium patens (spreading earthmoss): 112277445
Help
Entry
112277445 CDS
T01041
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03030
DNA replication
ppp03410
Base excision repair
ppp03420
Nucleotide excision repair
ppp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112277445
03410 Base excision repair
112277445
03420 Nucleotide excision repair
112277445
03430 Mismatch repair
112277445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112277445
03036 Chromosome and associated proteins [BR:
ppp03036
]
112277445
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112277445
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112277445
DNA Replication Termination Factors
ELG1-RFC complex
112277445
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112277445
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112277445
Check point factors
HRAD17(Rad24)-RFC complex
112277445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
RsgA_GTPase
ABC_tran
Sigma54_activ_2
Mg_chelatase
AAA_22
AAA_5
RuvB_N
AAA_16
AAA_29
Rep_fac_C
DUF815
AAA_23
AAA_2
nSTAND3
AAA_24
BsuBI_PstI_RE
Motif
Other DBs
NCBI-GeneID:
112277445
NCBI-ProteinID:
XP_024365542
UniProt:
A9SKH1
LinkDB
All DBs
Position
25:3667043..3670953
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPRTLDKVMVHKEEATNLKNLIAQGDCPHLLFYGPSGAGKKTLIMALLREMFG
SSAEKVKVENKPWKVEAGTRKIEVELTTVSSNHHVELNPSDAGFQDRYVVQEIIKDMAKN
RPLDVAGNRGFKVLVLNEVDKLSKEAQHSLRRTMEKYSAACRLLLCCNSASKVIEAVRSR
CVNIRINSPSRDDIVDVLMFVAKKENLILPPELAGRIAHHSNRNLRRSILCLEACKAKQY
PFTADQEVQTTDWEQFIVGLANDIVTEQSPKKLFQVREKLYELLVNCIPPEVILKRLLDE
LMKKLDSELKHEVCHWAAFYEHRMQQGQKAIFHLEAFVAKFMSIYKKFLINTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtggacaagtaccggccgcgaaccttggacaaggttatggttcataaagag
gaagcgacgaaccttaagaatttgattgcgcagggtgattgtcctcatcttcttttctat
ggaccctctggagctggtaagaagaccctcatcatggcgttgcttcgggagatgtttgga
tccagcgctgaaaaggtgaaagtggagaacaagccatggaaagttgaggctgggactcga
aagattgaggtagaacttacaactgtatcaagtaatcatcatgtggagctcaatccaagt
gatgcagggtttcaggatcgttacgtggtccaggagatcattaaagatatggctaaaaac
cggcctctagatgtagctggcaacagaggattcaaagtcttggttctgaacgaagtagac
aaactctcgaaggaagcgcaacactctttgcgacgtacaatggagaagtacagtgctgca
tgtcgtcttcttttatgttgcaatagtgcctcaaaggttattgaggcagtgcggtcacgt
tgtgtcaacatacggatcaattctccttccagagatgatattgttgatgtccttatgttc
gtagcgaaaaaggagaatttgatacttccccccgaactggcgggccgcatagcgcatcac
tccaatcgaaatctaaggagatccatattgtgcttggaggcctgcaaagccaaacagtat
ccattcacagctgaccaagaggtgcaaacaaccgactgggaacagttcattgtggggctt
gctaatgatattgtcaccgagcaaagccccaaaaagttgttccaggttagagagaaactt
tatgagctacttgtgaactgcattcctcccgaagtcatactcaagagattactggatgag
ttgatgaagaagctggattcagagctgaagcacgaggtctgccactgggctgccttttac
gagcatcggatgcagcagggtcagaaggctatctttcacctagaagcctttgtagctaag
ttcatgagtatctacaagaagttcctcatcaatacattcggatga
DBGET
integrated database retrieval system
