Physcomitrium patens (spreading earthmoss): 112277478
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Entry
112277478 CDS
T01041
Name
(RefSeq) THO complex subunit 4A isoform X1
KO
K12881
THO complex subunit 4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03015
mRNA surveillance pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112277478
09122 Translation
03013 Nucleocytoplasmic transport
112277478
03015 mRNA surveillance pathway
112277478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112277478
03041 Spliceosome [BR:
ppp03041
]
112277478
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112277478
TREX complex
112277478
Spliceosome [BR:
ppp03041
]
Complex C
Other components
EJC/TREX
112277478
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112277478
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_10
Motif
Other DBs
NCBI-GeneID:
112277478
NCBI-ProteinID:
XP_024365628
UniProt:
A0A2K1IEQ6
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All DBs
Position
25:complement(9452998..9456168)
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AA seq
284 aa
AA seq
DB search
MTSALDMSLDDLIKSNKTATHGGRGGGRGAAAPVPRRVGATAAAEEGYPDSRMSGPARRQ
VTRATVRPTPYATAKPVRRAMDSPWQHDMYENFAPAPSASVRGTGGNIETGTKLYISNLD
HGVSNDDIKELFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVNAMRRYNNVQLDGK
PMKIEMIGTNLVAAPVPAIRSSGAMASLAARARHLSSTSLPFARGPVSDRGRPGSSALRG
RGGGRSAGGVGGRGERRSGPAVEKSAEDLDAELESYHAEAMQTN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgcgttggacatgtcgttggacgacttgataaagtcgaacaagactgccacg
catggcgggagaggcggtggtcgaggcgcagcagctcctgtgcctcggcgagttggagcg
actgctgctgctgaagagggctaccccgacagtagaatgtcagggccagcccgcagacaa
gtgacccgggctaccgtccggccgacgccttacgcgaccgcaaagccagtccgccgcgcc
atggattcaccttggcaacatgacatgtacgaaaactttgccccggctccatctgcaagt
gttagagggacgggaggaaatattgagacgggcaccaaattgtacatatccaaccttgat
cacggagtatcgaacgatgacatcaaggaactgttcggggaggttggtgatttaaagaga
tgttctattaactatgatcgaagtggtcgttcgaagggaactgcggaggtggtgttcaca
aggaaacccgatgctgtgaatgcgatgaggagatacaataacgttcagctggacggaaag
ccaatgaaaattgagatgattggaacaaatttagttgctgctccagttccagccattcga
tccagtggagccatggcatcacttgctgctcgagcacgtcatctttcttccacatctttg
ccttttgctcgaggacctgtatctgatcgaggcagacctggtagcagtgcacttcgggga
cgtggtggtggaagaagtgctggtggtgtcggaggtagaggcgaacgcagaagtggccct
gctgtagagaagtccgcggaagacctggatgcggagttggaatcttatcatgcagaagct
atgcaaacaaattag
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