Physcomitrium patens (spreading earthmoss): 112277500
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Entry
112277500 CDS
T01041
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112277500
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
112277500
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_15
RsgA_GTPase
AAA_28
AAA_22
AAA_16
AAA_30
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
112277500
NCBI-ProteinID:
XP_024365695
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All DBs
Position
2:complement(8369947..8374038)
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AA seq
597 aa
AA seq
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MVSDASKKKAAAKKLAAAEKRGSKSAAVVAQSKLKDVSNGTTADTLAEELAAANITDRTC
TGILASHAQSRDIHIESLSVTFHGHELVADSTLELNYGRRYGLLGLNGCGKSTLLTAIGL
REVPIPEHMDIYHLTREIDATDMTSLQAVMNVDSERLLLEKEAEKLSQQDDGGGEPLERI
YERLEAMDSATAEMRAAQILHGLGFTKKMQNKKTRDFSGGWRMRIALARALFMNPTILLL
DEPTNHLDLEACVWLEETLKKFERILVVVSHSQDFLNGVCTNIIHMQNKQLKFYTGNYDQ
YCQTRAELEENQMKQYRWEQEQISAMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLA
EKVVRDKVLTFRFTDVGKLPPPVLQFVDLKFGYTPDQLIYEKVDFGVDLDSRIALVGPNG
AGKSTLLKLMTGELEPLDGMVRRHNHLRIAQYHQHLAETLSLEMSALQYMMSEYPGLEEE
KMRSAIGRFGLTGKAQVMPMGNLSDGQKSRVIFAWLAWRLPHLLLLDEPTNHLDIETIDS
LAEALNEWDGGLVLVSHDFRLINQVAKEIWVCEKKTITRWNGDIMDFKRHLKKTAGL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagacgcaagcaagaagaaggccgcggccaagaagcttgctgcagccgagaag
cgtggatctaagtctgcggctgttgttgctcagtcaaagttgaaagatgtgtccaacggt
accacagctgataccctggcggaggaattagctgccgccaatatcacggatcggacgtgt
acgggtattttagcgtcgcacgcccagtcaagggatattcatatcgaatctttgtctgta
acgtttcacggtcacgagctggttgcagactcaactttggaattgaattatggaagacgg
tacggattacttggactcaatggttgtggaaagtcgacgctgcttactgcaatcgggctt
cgagaagttccaattccagagcacatggatatttaccacttgactagagagattgatgcc
acagacatgacgtcgcttcaagctgttatgaacgttgattctgagaggttactcttggaa
aaggaggctgaaaagctttcccaacaagatgatggtggtggtgagccgttggagcgcatt
tatgagagattagaggccatggattcagctacagctgagatgcgagcagcgcaaatctta
catggtctcggatttacaaagaaaatgcaaaataagaaaacgcgggacttttccggaggt
tggagaatgagaatagcactggctcgtgctttgttcatgaacccaacgatcctcttgctg
gatgaacccacaaatcatcttgatttggaggcttgtgtgtggttggaggagaccttaaag
aagtttgagcgaattttggtggttgtatcacattcccaagattttttgaatggtgtgtgc
acgaacatcattcacatgcaaaacaaacaactcaagttttacacaggaaattatgatcag
tattgtcagacacgagcagagctggaagagaatcagatgaaacagtatcgctgggaacaa
gagcagatctcagcaatgaaggaatatatcgccaggttcggacacggttctgcaaagctt
gctcgacaggctcaaagtaaagagaagacactcgctaagatggaaagaggtggactagct
gagaaggtagtcagggataaggttttgactttcaggttcacagatgttggaaaattgccg
ccacctgtgcttcagtttgttgacctaaagttcggctacacacctgaccagttgatctac
gaaaaggtggattttggagtggatcttgattctcggattgcccttgtgggaccaaacgga
gcaggaaagagtactctcttaaaactcatgactggtgagctagagccactagatggtatg
gtacgccggcacaaccatcttcgcattgctcaatatcatcagcatcttgcggagacttta
tcccttgagatgtcagctcttcaatatatgatgtctgagtatcccggtttggaggaagag
aaaatgcgatctgcaatcgggcgctttgggctcacaggcaaagctcaggtcatgccaatg
ggtaatctttctgatgggcagaaaagccgtgtgatttttgcgtggttagcgtggagactt
ccccacctactcttactggacgaaccgacgaatcatttggatattgaaacaattgattct
cttgcggaggctctgaatgagtgggatggaggtctggtccttgttagtcacgacttcaga
ctaattaaccaggttgccaaagagatttgggtatgtgagaagaaaacaattaccaggtgg
aacggtgacatcatggatttcaagagacaccttaagaagaccgcgggactctag
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