Physcomitrium patens (spreading earthmoss): 112277874
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Entry
112277874 CDS
T01041
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112277874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112277874
03110 Chaperones and folding catalysts [BR:
ppp03110
]
112277874
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112277874
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112277874
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112277874
Messenger RNA biogenesis [BR:
ppp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112277874
Chaperones and folding catalysts [BR:
ppp03110
]
Heat shock proteins
HSP60 / Chaperonin
112277874
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112277874
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112277874
Exosomal proteins of other body fluids (saliva and urine)
112277874
Exosomal proteins of breast cancer cells
112277874
Exosomal proteins of colorectal cancer cells
112277874
Exosomal proteins of bladder cancer cells
112277874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
112277874
NCBI-ProteinID:
XP_024366438
LinkDB
All DBs
Position
26:complement(1032551..1038910)
Genome browser
AA seq
580 aa
AA seq
DB search
MYRAAATLSARINRGRALVQNFNKLQSTRNFSAKDIRFGVEARALMLQGVEQLADAVQVT
MGPKGRTVVIEQSFGSPKVTKDGVTVAKAIEFKDRLQNVGASLVKSVASSTNDVAGDGTT
CATVLTRAIFVEGCKSVAAGMNAMDLRRGINLAVDSVVSHLKSQAKMISTSEEIAQVGTI
SANGDSEIGDLLARAMEKVGKEGVITVSDGKTLFNELEVVEGMKLDRGYISPYFITNAKT
QKVELENPVILIHEKKINSLQAILPVLELVVRDQRPLLIVAEDVESEALATLIVNKLRGG
VKVCAIKSPGFGENRKALMQDLAVLTGGQLISEDLGFKLEKVTPDMLGKCKKVTVSKDDT
IILDGGGDKAALEERTEQIREAISAATSDYDKEKLQERLAKLSGGVAVLKIGGASEVEVN
EKKDRVTDALNATKAAVEEGIVPGGGVALLYASRELEKVQTANFDQKIGVQIIQNALRMP
AYTIARNAGVEGAVVVGKLMEQTNMSIGYDAAKAEYVDMVKAGIIDPVKVIRTALVDAAS
VASLMTTTEAVIADFPKDDKEAMPGMGGGMGGMGGMGGMY
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtgcggcggctacgttgtcggcccgtatcaacaggggccgcgcactagtacaa
aattttaataaacttcagtcaacccggaatttttctgcaaaagatattaggtttggggtc
gaggcccgcgcccttatgcttcaaggtgtggagcaacttgcagatgctgttcaagtgacc
atggggcctaaggggcgtacggttgttatcgagcaatcatttggctctccaaaagtgact
aaggatggggtcactgtggctaaagccatcgagttcaaggacaggctgcagaatgtggga
gcgtcccttgttaaatcagttgctagttctacaaatgatgtagctggagatgggacaact
tgtgcaacggtgctcacccgagctatttttgttgagggatgtaagtcagttgcagctggc
atgaatgcaatggacttacgtaggggtatcaatcttgctgttgactctgtcgtatcccat
ctaaaaagccaagccaagatgattagcacatcggaagagattgcacaggttggaactatc
tctgcaaatggagatagtgaaattggcgatttgctcgctcgcgccatggagaaggttggc
aaggaaggtgtcatcactgtgtcggatggaaagactttatttaatgagttggaggttgtg
gagggcatgaagcttgacaggggatatatttccccctatttcatcactaatgcaaagacc
cagaaagtggaattggaaaatcccgtcatcttgatccacgagaagaaaatcaacagtctt
caagcgattcttccagtgcttgagctcgttgtcagggatcaaaggccactattgattgtt
gccgaggatgtggagagtgaagctctggcgacactgatagtcaacaagctcaggggaggt
gtgaaggtgtgtgctatcaagtctcctggatttggagagaacaggaaagcgctcatgcag
gaccttgcagtgttaacaggtggtcagctcattagtgaagaccttggatttaaactcgag
aaggtcactcccgatatgcttggaaagtgcaaaaaggtcactgtatcgaaagatgacacc
attatcttggatgggggaggtgacaaggctgcgctcgaagagcgaactgaacagatccga
gaggctatcagcgctgccacttccgactacgataaggagaaactgcaagagaggttggct
aaattgtcaggtggtgtagcggtacttaagatcggaggagctagtgaagtcgaggtaaac
gagaagaaagaccgtgtaactgatgcattgaacgccactaaagctgctgttgaggagggt
attgttcctggtggtggtgtggctcttttgtatgcttctcgagagctggagaaagttcaa
actgcgaactttgaccagaagatcggagtgcaaatcatccaaaatgctttgaggatgcct
gcgtacacaattgcacgcaatgctggagtggagggagctgtcgttgttggaaagcttatg
gagcaaacaaacatgagcattggatatgatgctgcaaaagccgagtacgtcgacatggtg
aaggctggaattattgatcctgtaaaggttattagaacagctcttgttgatgccgctagc
gttgcatcactgatgacaacaactgaagcagtaattgctgatttcccgaaggatgacaag
gaggccatgcctggcatgggaggtggaatgggaggaatgggaggcatgggaggaatgtac
tag
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