Physcomitrium patens (spreading earthmoss): 112277899
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Entry
112277899 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112277899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112277899
Spliceosome [BR:
ppp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
112277899
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
FSAF1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
112277899
NCBI-ProteinID:
XP_024366520
UniProt:
A0A2K1KZY5
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Position
2:complement(1870378..1875266)
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AA seq
551 aa
AA seq
DB search
MKRERETDVDQEEDGATAPARPVEIDPHSDELNGIRKKFKIPDSPENGVLSTLGHYGEEE
EEEEEVTVKEKVYEYESDEEAERSRAGLRRDIELRKDCPYLDTVNRQVLDFDFEKFCSVS
LSNLNVYACLVCGKYFQGRGRKSHAYTHSLEAGHHVFINLHTEKVYCLPDGYEVNDPSLD
DIRHVLNPRFTRAQAEQLDKIKQWSRALDGSDYLPGMVGINNIKENDFVNVTIQSLMRVT
PLRNYFLLPENYKHCKSPLVQRFGELTKKIWHTKNFKGQVSPHEFLQAVMVASKKRFRIG
VQSDPVEFMSWLLNTLHTDLGGTKKRNSSVIYKCFQGELEVTKETQKKGFAEEREGDVPS
GADDGGKLDTTDLHRDVSKMPFLMLGLDLPPPPLFKDVMEKNIIPQIPLFNILKKFDGET
VTEVVRPQLARMRYRITRLPQYIILHMRRFTKNNFFMEKNPTLVNFPVKNLELKDYIPLP
KSKDGEKQRTKYDLIANLVHDGKPGEGSYRVFVQRKSDEMWYEMQDLHVNETLPQMVALS
ETYMQIYEQQQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgaaagagagactgacgttgatcaggaggaagatggagctactgcaccagct
cgtccagttgagattgatcctcacagcgatgagttgaatggcattcggaagaagtttaag
atccctgactctcccgaaaacggcgtgctgtcgacgcttggtcactacggggaggaagag
gaagaagaagaggaggtgacggtgaaagaaaaggtgtacgagtacgaaagtgacgaggag
gcggagcgcagccgtgcgggcctacggcgtgacattgaattgcggaaagattgtccatac
ttggatactgtcaacagacaggtgctggatttcgactttgagaaattttgctcggtctca
ctttccaatttgaatgtgtacgcatgccttgtgtgcgggaaatattttcaaggacgaggc
cgcaagtctcatgcatacacgcacagccttgaagctggtcatcatgtcttcatcaatctg
cacacggagaaggtttattgtctcccagatggctacgaagtgaacgacccttctctagac
gatattcgacatgtcttaaatcctcgattcacaagagcacaggctgagcaattggacaaa
atcaaacaatggtcaagggcgttagacggctcagattatcttccaggaatggtgggcata
aacaacatcaaggaaaacgactttgttaatgttaccatacagtctcttatgcgagttacc
ccactgaggaactattttttgcttcctgagaactacaagcattgcaaatcgccgctggtc
cagcgctttggtgaattgacaaaaaaaatatggcatacaaagaattttaaggggcaggtc
agtcctcatgagtttttgcaggcggtgatggttgcaagtaagaagaggtttcgaatcggt
gtgcaatctgatcctgtggagttcatgtcatggcttctcaacactcttcatacagacctt
ggtggcactaagaagcgcaatagcagtgttatttacaagtgttttcagggggaactggag
gttaccaaggagactcagaagaaggggtttgctgaagaacgcgagggtgatgtgccatct
ggtgcagatgatggaggaaagttggatactacagatctgcacagggatgttagcaaaatg
ccatttcttatgctgggccttgacttgccccctcctccactctttaaagatgtcatggaa
aagaacattataccccagattcctcttttcaatatattgaagaagtttgatggagaaacg
gtaacagaagtagtcagaccccagcttgcccggatgcggtatcgtattacccggttgcca
cagtatattattctccacatgcggcgctttaccaagaacaatttcttcatggaaaagaat
ccaactttagtgaactttcctgtcaaaaatttggagctaaaagattacataccgttgccg
aaatctaaggatggtgaaaaacaacgtacgaagtatgacttgattgccaatcttgtccat
gatgggaaaccaggtgaaggttcctacagggtttttgttcagcgcaagtcagatgaaatg
tggtatgaaatgcaggatcttcacgtgaatgagactttgccccagatggtggcactttcg
gaaacttacatgcagatatacgaacaacagcaataa
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