Physcomitrium patens (spreading earthmoss): 112277962
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Entry
112277962 CDS
T01041
Name
(RefSeq) beta-galactosidase 8-like isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00052
Galactose metabolism
ppp00511
Other glycan degradation
ppp00531
Glycosaminoglycan degradation
ppp00600
Sphingolipid metabolism
ppp00604
Glycosphingolipid biosynthesis - ganglio series
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
112277962
09103 Lipid metabolism
00600 Sphingolipid metabolism
112277962
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112277962
00604 Glycosphingolipid biosynthesis - ganglio series
112277962
00511 Other glycan degradation
112277962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112277962
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
112277962
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112277962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
DUF6020
Motif
Other DBs
NCBI-GeneID:
112277962
NCBI-ProteinID:
XP_024366644
LinkDB
All DBs
Position
26:complement(895252..903324)
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AA seq
690 aa
AA seq
DB search
MRRIPEQYFNFCCSLRSVMAMFLERMEFKVVLLAMLLPCLWTSVMAGSTSNHSFVIENDL
FLKDGIPFRILGGELHYFRVHPQLWEDRLLRVKSLGLNTIQTYVPWNLHEPRPGHLNFNG
SADLLSFLKLAHRLDLLVMLRIGPYMCGEWDLGGLPAWLLELKPSVRLRSSDAQYLARVD
NWWKELLPMVAPELFLAGGPVIMVQIENEYGTYGSDKLYLKFLQSQARLHLGDDIIIYTT
DGAVEENIRDGSLPEAGVLAAINFQTGSDPASAFALQKRHNPPGMSPPLATEFYTGWLSH
WGEKLAKTDAKSTAEALDNILRLNASVVLYMVHGGTNFGFFSGANTGTGPSDFQPDITSY
DYDAPIGEAGDVGGVKYQEIRNVLSKYAAGRLPDPPPLPQRTAYGEVTMKAMGSLFDVLK
VVSTPPGGMKLEWPMPMEQLRQGSGFILYRSYLPAYARPGSRLSVVEVYDRAQVFVGSAT
NNRIFLGTLERWSRNTLTLPASASVSGLQLDILVENMGRVNYGLFIGENKGITEAVLLDD
YPILGWSVHTIGLDSVGGLKPSAFQKTIPPHFELDEIITTKIKRTPQLVRPFVDLVNGPV
FYEGTLNVTQPSDTFMSLRGWNKGVAFINGFNLGRFWPSMGPQCTLYIPGPLLQPGQNKL
ILLELESSSPVQTIDFTHTADFTCGIQMRA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgaattccagagcaatacttcaatttctgctgtagtttaagatccgtcatggct
atgtttttggaaaggatggaattcaaggtggttttgctggcgatgcttctgccctgcctc
tggacttccgtcatggctggatctacctcaaaccacagcttcgtcattgaaaacgatttg
tttttgaaagatgggattccgttccgaattcttggtggcgagttgcactacttccgtgtg
cacccacagctctgggaggatagactacttcgagtaaaatcattgggcttgaacacaata
caaacctacgtcccttggaatcttcatgaaccgcgacctggtcacctcaactttaacggc
tccgcagacctattgtcatttttgaagctggcccatcgcttggatttgttggttatgctt
cgcatcggaccttacatgtgcggagagtgggacctgggaggccttcctgcctggctactc
gagttgaaaccttcagtgagactgcgatcatccgatgcacagtatctcgcccgagtggat
aattggtggaaggaacttcttccaatggtagcgccggaactattcttagcaggcggccca
gtgattatggtgcagatcgaaaatgaatacggaacatatgggagtgacaagttgtacctt
aaattcctccaaagtcaagctagactgcatcttggtgacgatataatcatatatacaact
gatggtgcagtcgaagagaatatacgcgatggctctctaccagaagctggtgtgttggca
gccataaattttcaaacaggctccgatccggcttctgcatttgctcttcaaaaacgtcac
aatccccctggaatgtcaccaccacttgctacggagttctatacgggctggctgagccat
tggggagagaaactggccaaaaccgatgcaaagtctactgcagaagccctggataatata
ttaaggctcaatgcttctgttgtactttatatggtccacggaggaacgaattttgggttc
tttagtggggccaacacagggacaggaccttctgatttccaaccagatattacatcctat
gattatgatgctccgattggggaggctggagatgttggcggtgtcaaatatcaagaaata
aggaacgtgcttagcaagtacgctgctggaagactgcctgacccccctccccttcctcaa
cgaaccgcgtatggagaagtgacgatgaaagcaatgggctcgctttttgatgttttgaag
gttgtcagtactcctcctggcggtatgaagttggagtggcccatgccaatggaacaactc
agacaaggctctgggtttattttgtaccgttcatatcttcctgcctacgcacgaccagga
agtaggctttctgtagtggaggtgtatgatagagcacaagtattcgttggaagtgccact
aacaaccggattttcttgggcacattggaacggtggtccagaaatacattaactttgcca
gcttcagcttctgtatcgggtttacagcttgacattctggttgagaacatggggcgtgta
aattatggactcttcatcggtgaaaacaaaggaatcaccgaggctgtattgctagatgat
tatccgatacttggctggagtgtacacacaatcggacttgacagtgtcggaggccttaag
ccatctgcttttcagaagactatccctccacatttcgaactggatgagataatcacaacc
aaaataaagcgaactccgcaactcgtacgtccgtttgtggatcttgtaaatggccctgtt
ttctatgagggaactctcaacgtcacgcagcccagtgatacattcatgtctttaagaggc
tggaacaaaggggtcgcattcataaatggattcaacctggggagattttggccgagtatg
ggcccgcagtgtacactatacattcccggcccgctacttcaaccagggcaaaataaactg
atacttttagaactagagagctcaagcccggtgcagaccatcgacttcactcatacagct
gacttcacttgcgggatacagatgagagcataa
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