Physcomitrium patens (spreading earthmoss): 112278066
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Entry
112278066 CDS
T01041
Name
(RefSeq) cell division control protein 48 homolog A
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112278066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112278066
03009 Ribosome biogenesis [BR:
ppp03009
]
112278066
04131 Membrane trafficking [BR:
ppp04131
]
112278066
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112278066
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112278066
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112278066
Membrane trafficking [BR:
ppp04131
]
SNARE
SNARE associated proteins
Others
112278066
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112278066
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112278066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
CDC48_2
AAA_2
AAA_5
AAA_16
AAA_22
AAA_14
TIP49
NPHP3_N
nSTAND3
AAA_17
RNA_helicase
AAA_28
Mg_chelatase
AAA_18
nSTAND_NTPase5
ABC_tran
AAA_lid_PRS2_C
Vps4_C
ATPase_2
Parvo_NS1
Viral_helicase1
AAA_7
IstB_IS21
NB-ARC
ResIII
TsaE
NACHT
Zeta_toxin
DUF815
AstA_C
Zot
Motif
Other DBs
NCBI-GeneID:
112278066
NCBI-ProteinID:
XP_024366863
UniProt:
A0A2K1ICA9
LinkDB
All DBs
Position
26:4800299..4805283
Genome browser
AA seq
813 aa
AA seq
DB search
MATPAAGPAGKSSDPKPKKDFSTAILERKKAPNRLVVDEAVNDDNSVVALSMETMEKLQL
FRGDTVLIKGKKRKDTVCIVLSDDTCDEHKIRMNKVVRANLRVRLGDVVSVHQCPDVKYG
KRIHVLPFDDSIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPA
EYCIVAPDTEIFCEGEPLRREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKS
IGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE
AEKNAPSIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNS
IDPALRRFGRFDREIDIGVPDEVGRLEVIRIHTKNMKLAEDVDLERIAHDTHGFVGADLA
ALCTEAALQCIREKMDVIDLEDDTIDAEVLNSMAVTNEHFQTALGISNPSALRETVVEVP
NTTWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA
NECQANFISVKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIANQRGSSQGD
AGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEAS
RLRIFQAALRKSPLAKEVDLEALARYTQGFSGADITEICQRACKYAIRENIEKDIEREKR
RAENPEAMEEDEVEEVAQIKASHFEEAMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEF
RFPDRPAAAGAPSAAEAPSAFGTDAADEDDLYS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccgcggctggacctgctgggaaatcctcggatcccaagccaaagaaagac
ttttccaccgctattttggagcgcaagaaggctccgaaccgtttggttgtcgatgaggct
gtgaatgatgataattcggtggtagcattaagtatggagactatggaaaagttgcagcta
tttcgtggggacaccgtgctgatcaagggtaagaaacgcaaagatactgtgtgcattgtc
ttatcagatgacacctgcgatgagcataaaatacgcatgaacaaggtggtaagggccaat
cttcgggtgcgccttggagatgtggtatcagttcaccaatgtccggatgttaaatatggt
aaacggattcatgtactgccgtttgatgactcaatcgagggtgtgactggaaacctattc
gatgcttacttgaagccttactttttggaagcttacagaccagtccgcaaaggtgattta
ttcttggtgcgaggaggtatgaggagtgtggaatttaaagttgttgagacagaccctgca
gagtactgcatcgttgctcctgatacagaaatcttttgcgaaggcgagcctttgaggcgt
gaggatgaggaaagattagatgaagttgggtatgatgacgtgggtggagtccgcaagcag
atggcacagatccgtgaattggtagagttacctttgcggcatccgcagcttttcaagtcc
attggtgttaagccgcctaagggtattcttttatttggtcctcctggttccggaaagacg
ttgattgccagagctgtggccaatgaaactggggcattctttttcctcatcaatggccct
gaaatcatgtccaagctggctggtgagagcgagagtaatctaaggaaggcttttgaggag
gcggagaaaaatgcgccatccattatttttattgatgagattgactccattgcacccaag
agagaaaagactcaaggggaggtggaaaggcgaattgtatcgcagttattaaccctcatg
gatgggttaaaatcccgtgcccatgtcattgttatgggagctaccaaccgcccaaacagt
attgaccctgcacttcgacgtttcggccggtttgatcgtgaaattgatattggggtcccg
gatgaagttggtcggttggaagttattcgtattcacactaagaatatgaagcttgctgag
gatgttgatttggagagaatcgctcacgacactcatggatttgttggtgctgatttggcg
gcactctgcacagaagcagcactgcaatgtattcgtgagaagatggatgtgatagattta
gaagatgatacaattgatgcggaagtgctaaactctatggctgtaacgaatgaacatttc
caaaccgcacttggtattagcaatccatctgctcttcgagagacagtggttgaggtaccg
aatactacctgggaagacattggaggtctggagaatgttaagcgggagctccaagagact
gtgcaatatccagttgagcatcctgagaagtttgagaagtttggaatgtcgccgtctaag
ggtgtattgttctatggtccgcctgggtgtggaaagacgctgctcgccaaggcaattgcc
aatgaatgtcaagccaattttatcagtgtgaaggggcccgagctgttgaccatgtggttc
ggtgagagtgaagcgaatgtgcgagatgtatttgacaaggctcgtcagtcagctccttgt
gttctctttttcgatgagcttgactcgatcgccaatcagcgtggcagcagtcagggtgat
gctggtggtgctgcggatcgtgtcttaaaccagctgcttacagagatggatggtatgaac
gccaaaaagacggtgttcatcattggggcaactaatagacctgatattatagactctgca
cttctcagacctggacgtttggatcagctcatttacattcccctaccagatgaagcctct
cgcttgaggattttccaggcagctttaaggaagtctcctctagccaaggaggtggatttg
gaagccctggccaggtacacacaaggtttcagtggggcagatatcactgaaatctgccag
cgcgcttgcaagtacgccattcgtgaaaacatcgaaaaggacattgagagggaaaagagg
agagcggagaatcctgaagccatggaagaagatgaggtagaagaagtagcgcagatcaag
gcatctcacttcgaagaagcaatgaaatatgctcgtcgtagtgtgagtgatgctgacatc
cggaaataccaagcatttgctcagactcttcagcagtcgcgtggatttggatcagagttt
cgatttccagatcgcccagctgctgctggagcaccgagtgccgcggaagctccttcggcc
tttggtactgatgctgcagatgaggatgatttgtacagctag
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