Physcomitrium patens (spreading earthmoss): 112278340
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Entry
112278340 CDS
T01041
Name
(RefSeq) phytochrome 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
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Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
HATPase_c
GAF
HisKA
PAS_4
PAS_9
PAS_8
Motif
Other DBs
NCBI-GeneID:
112278340
NCBI-ProteinID:
XP_024367432
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Position
27:4651136..4657014
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AA seq
1126 aa
AA seq
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MSTTKLAYSSGSSVKSKHSVRVAQTTADAKLQAVYEESGDSGDSFDYSKSVHASKSTGEN
VPALAVTAYLQRMQRGGLVQTFGCMLCVDESSFRVIAYSENAPEMLDLMPQAVPSVGQQE
VLGIGTDARTLFTPSSAAALEKCAGAVDVTMLNPISVHCRSSGKPFYAILHRIDVGLVID
FEPVRPNDAVVSSAGALQSHKLAAKAISRLQALPGGDIGLLCDTVVEEVRQLSGYDRVMA
YKFHEDEHGEVLAEIRRSDLEPYLGLHYPATDIPQASRFLFMKNRVRMIGDCYAPPVKVV
QDKDLRQPISLAGSTLRAPHGCHAQYMGNMNSIASLVMAVIVNDPDEDPNSRGGQQRGRK
LWGLVVCHHTSPRTVSFPLRSACEFLMQVFGLQLNMEVELAAQLREKHILRTQTLLCDML
LRDAPIGIVSQSPNIMDLVKCDGAALYYGKRFWLLGITPNEVQIKEIADWLLEHHQDSTG
LSTDSLADAGYPGAAQLGDAVCGMAAAKITPRDFLFWFRSHTAKEIKWGGAKHDPDEKDD
GRKMHPRSSFKAFLEVVKRRSLPWEDIEMDAIHSLQLILRGSFQDIDDSDTKTMIHARLN
DLKLQGMDELSTVANEMVRLIETATAPILAVDSSGFINGWNAKVAELTGLPVGEAMGRSL
VKDLILEESIDVVQRLLYLALQGEEEQNIEIQLKTFGPQKEKGAVILIVNACSSRDVQDN
VVGVCFVGQDVTGQKQVLDKFTRIQGDYKAIVQNPNPLIPPIFGTDEYGYCSEWNPSMEK
LTGWKREEVLGKLLVGEIFGMQLMCCRLKGQDAMTKFMIALNSAMDGQDTDRFPFSFFDR
QGKYVDALLTVNKRTDAEGSITGVFCFLHTTSVELLQALTVQRATEKVAFAKLKELAYIR
QEIKNPLYGIMFTRNLMEDTDLSEDQRQFVETSAVCERQLRKVLDDMDLESIEDGYLELD
TNEFVMGTVMDAVVSQGMITSREKGLQLIRETPREIKNMCLFGDQVRLQQVLADFLLNAV
RFTPSSEGWVGIKVVPTKKRLGGGIHVMHLEFRVTHSGMGLPEELVHEMFDRGRGMTQEG
LGLSMCRKLVKLMNGNVQYIRETGKSYFLVEVELPLAQRDDAGSVR
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccaccaagttggcatactcgtcagggagttctgtgaagtcgaagcatagtgta
cgggttgcgcaaactacagcagatgccaagctgcaggcagtgtatgaagaatccggagat
tcgggagactcatttgattattccaaatcagttcatgcgtccaaatccactggcgagaat
gtccctgccctagcagtcaccgcgtaccttcagcgcatgcaaagagggggtttggtgcag
acattcgggtgtatgctatgtgtggacgagagtagttttagggttattgcttacagcgag
aatgcgccagagatgcttgacctgatgccacaagcggtgcccagtgtgggtcagcaggaa
gttctgggcattggaaccgatgcaagaactttgttcaccccttccagtgcggccgccctg
gagaaatgtgccggagcggtggatgtgaccatgctgaaccctatctcagtgcactgtcga
agctcggggaagccgttctatgcgattctgcaccgtattgacgtaggactggtaattgat
tttgaaccagtgcgcccgaatgatgccgttgtgtcctccgcaggggctttgcagtcgcat
aagttggctgcaaaagcgatatctcggctgcaggcacttcctggcggagacattggcctc
ctttgtgatacagttgtagaagaggtacgccagctttccggttacgatcgtgtcatggca
tacaaattccacgaagacgaacatggtgaggtcttggcggagattcgaagatcagattta
gaaccttacttaggtctacattacccagcaacagatatcccacaggcgtcaagattcctg
tttatgaagaacagggtgcgaatgataggtgattgctatgctcctcctgttaaagtggtt
caggacaaggatttgaggcagcctattagtctggccgggtctactttacgggcccctcat
ggctgccatgcgcaatacatgggcaacatgaactccatcgcttcgttggtgatggcagtt
atcgtgaatgatccggatgaggatcctaattcacgtgggggccagcagagagggcgcaag
ctctggggattggtggtttgtcaccacacgtctccgaggaccgtctcctttcctttgaga
tcggcctgtgagttcctgatgcaggtgttcggtctgcagctgaacatggaagttgaactt
gcagctcagctaagagaaaaacatattttgagaacacaaacccttctctgtgacatgtta
ttgcgggatgcacccatcggaattgtttctcagtcacccaatatcatggacttggttaaa
tgcgacggtgcagcactttactatgggaaaaggttttggcttttgggaatcacacctaac
gaggtccagattaaggaaatcgcggactggctcctagaacatcatcaagattcgaccggt
ttgagtacagacagcctggccgatgctggttaccctggcgcagcgcaacttggtgatgct
gtgtgtggaatggctgcggcaaagatcactccaagggactttcttttctggttcaggtca
cacaccgccaaggagattaagtggggtggtgccaagcacgatcctgatgaaaaggatgat
gggaggaaaatgcatccccgctcctcgttcaaggcctttctagaagttgtgaagagaaga
agtttgccatgggaggacatagaaatggacgcaattcattctcttcaactcattttgaga
ggttcattccaggatatagacgacagtgataccaaaactatgatacacgcccgactcaac
gacttaaagctccagggcatggatgaactcagtacagttgctaatgaaatggttagattg
atagagacagcgactgcaccaattctcgctgtcgattcgagtggattcatcaatggttgg
aatgccaaagtagctgaactgactggacttccagttggagaagccatgggtcggtcgctg
gttaaagatttaattttagaggaatcaattgatgttgttcagcgacttctctaccttgca
ttacaaggtgaagaagaacaaaatattgagattcagttgaagacctttgggccacaaaaa
gagaagggcgcagtgattttgatagtgaatgcgtgctccagcagggatgtacaagacaat
gtcgttggagtttgttttgtggggcaagatgtgacaggtcaaaaacaagttttggataaa
tttactcggatacaaggcgactacaaagcaatagttcagaacccaaaccctttgattcct
cctatatttggcactgatgaatatggatattgctctgagtggaatccttcaatggagaag
ctgactggatggaagagagaagaggtgcttgggaaactgctagtgggtgaaatttttgga
atgcaacttatgtgttgccgactgaaaggtcaagatgcaatgacgaaatttatgattgca
ttaaatagtgcaatggatggtcaagatacagatcggtttcccttttccttctttgatcga
caagggaaatacgtagatgccctactcacagtcaataaaagaacggatgcagagggaagc
atcactggcgtattctgctttttgcacacaaccagtgtggaattattgcaagcattgact
gtccaacgtgcgacggagaaagtagccttcgcaaaactcaaggagttggcttacattcga
caggagatcaagaatcctttgtatgggattatgtttacacgtaatttaatggaagatacg
gacttatctgaggaccaaaggcagtttgtggagactagtgctgtgtgtgaacgtcaattg
cgcaaagtattggatgatatggatcttgagagtattgaggacgggtacttagagctggat
acaaatgaatttgtgatgggaacagtgatggatgccgttgtaagtcaaggaatgatcaca
tcaagagaaaaaggtctgcaattgatacgggagactcccagggagataaagaacatgtgt
ttatttggggaccaagtccgtttacaacaagtgctcgcggactttttgttgaatgcagtg
agattcaccccatcctctgaaggctgggtcgggatcaaggtggtcccaacgaagaagcgc
ctgggtggaggcattcatgtcatgcatctggaattcagggttacacattcaggaatggga
cttcctgaggagcttgtgcatgagatgtttgatcgaggacgaggcatgactcaagaaggc
ctggggctgagtatgtgtcgtaaacttgtaaagctaatgaatggtaatgttcaatatatt
agagaaacaggtaagagctactttttagttgaagtggagcttcctttggcacaacgagat
gatgcaggcagtgtgagatag
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