Physcomitrium patens (spreading earthmoss): 112278365
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Entry
112278365 CDS
T01041
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112278365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112278365
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
112278365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
112278365
NCBI-ProteinID:
XP_024367483
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All DBs
Position
27:2329888..2331312
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AA seq
316 aa
AA seq
DB search
MRPPLTRGGGGFRGGRGGRGGGRGDGGGRGGGRGFGGGRGGRGGDRGGRGMRGGGRGGGR
GGGGGRGGGLNGGAKVIIEPHRHEGVFVAKAKEDALVTKNLVPGESVYGEKRISVDNEDG
TKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYA
VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPMKYRMLVGMVDVIFADVAQPDQARIVAIN
AHNFLKNGGHFVISIKANCIDSTVPAEAVFAAEVKKLQKEQFKPAEQVTLEPFERDHACV
VGTYRAPKKAKAAAGS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccccgttgacgagagggggtgggggattccgaggagggagaggaggaagagga
ggagggagaggcgatggaggaggtcgcggaggcggccgtggctttggaggaggccgcggg
ggccgaggtggtgacagaggcgggcgaggaatgcgaggaggtggccgcggaggaggacga
ggcggtgggggaggtcgcggcggtggcctgaacggaggagccaaagtgatcatcgagcct
cacagacatgaaggcgtgttcgttgccaaggctaaggaagacgcgcttgtgacgaagaat
ctcgtccctggagagagtgtgtatggcgagaagcggatttcggttgataacgaagacggt
accaagacggagtaccgagtatggaatccttttaggtccaagctcgcggctgctatcttg
ggcggtgttgacaacatctggattaaacccggtgctcacgttctctacctaggtgctgcg
tcaggaacaaccgtttctcacgtttccgacgtagtgggaccgtcgggtattgtgtatgct
gtcgaattctctcaccggagtgggcgagacctcgtgaatatggcgaagaagcgaaccaat
gtcattcccatcattgaagacgcgagacatccgatgaagtaccgcatgttggtcggtatg
gtggatgttatctttgccgatgttgcgcagcccgatcaagcccgaatcgttgcaattaat
gctcataattttttgaagaatggtggccactttgtgatttcgattaaggctaattgtatc
gactcgaccgtgcctgctgaggccgtctttgccgccgaagtgaagaagttgcagaaggag
cagttcaagcccgccgagcaagtcacacttgaaccttttgagagggaccatgcttgtgtg
gttggtacttatcgtgcaccaaagaaagccaaggcagctgccggttcatag
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