Physcomitrium patens (spreading earthmoss): 112278413
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Entry
112278413 CDS
T01041
Name
(RefSeq) proteasome subunit beta type-1 isoform X1
KO
K02732
20S proteasome subunit beta 6 [EC:
3.4.25.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112278413
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppp01002
]
112278413
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ppp03051
]
112278413
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
112278413
Peptidases and inhibitors [BR:
ppp01002
]
Threonine peptidases
Family T1: proteasome family
112278413
Proteasome [BR:
ppp03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
112278413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Motif
Other DBs
NCBI-GeneID:
112278413
NCBI-ProteinID:
XP_024367641
LinkDB
All DBs
Position
27:complement(1476870..1480389)
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AA seq
245 aa
AA seq
DB search
MRSWKLAKMSMVFAPRLAESAPTSHVGASWSPYDNNGGTCVAIAGADYCVIAADTRMSTG
FSILTRDYSKIHHITEKCVLASSGFQADVRSLQKNLDARHQIYQHQHSKQMSCPAMAQLL
SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQ
LKSASPLVLPPRESSTPLTESEAVDLIKDTFASAAERDIYTGDGVEIVIINKEGIRRETM
ALKRD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcttggaaacttgcgaagatgtcgatggttttcgctccccgcctagctgaaagt
gcgcccacttcgcatgtaggcgcttcatggagcccttacgacaacaacggagggacatgt
gtggctatagctggagcagattactgcgtgatagcagctgatacgaggatgtctactggg
ttcagtattttaacccgggattattcgaaaattcatcatataacggagaaatgcgttctg
gcttcatctggatttcaagcagatgtcagatcgctccaaaaaaatttagatgctcggcat
cagatttatcagcaccagcatagcaagcagatgagctgtccagcaatggcgcagctactt
tcaaatactttatattacaagcgattttttccgtactattcattcaacgtgcttggtggc
ttggacaatgaaggtaaaggttgcgtctacacatatgacgctgttggttcttacgagcgt
tcgggatatagttctcaaggttctggtcagacacttatcatgcccgtcctggacaatcag
ctgaagtctgctagccctcttgtcctgccaccaagagagtcatcgactccccttactgag
agcgaggccgtggatctgatcaaggacacttttgcctctgctgctgagcgtgacatttat
actggtgatggtgtggagattgtgatcattaacaaggaagggatcagaagggaaacaatg
gccctcaagcgcgactag
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integrated database retrieval system
