Physcomitrium patens (spreading earthmoss): 112278414
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Entry
112278414 CDS
T01041
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112278414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112278414
Membrane trafficking [BR:
ppp04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
112278414
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF6891
Motif
Other DBs
NCBI-GeneID:
112278414
NCBI-ProteinID:
XP_024367646
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All DBs
Position
27:1480608..1483941
Genome browser
AA seq
200 aa
AA seq
DB search
MKITALLVLKAPAVQGGESLMLANASDVSHFGFFQRQAAKEFILFASRTISGRTPLGQRQ
SIEQDEYVVHCYNRSGLCGLVFADKEYPLRSAFSVINKVLDEYQRTFGDSWKIKNTDSTD
AWPYLPEALAKYQNPTEADKLAKIQKDLDETKVILHKTIESVLKRGENLDNLVDKSNDLS
SASQMFYKQAKKANQCCTIL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactgcgttgttggtgctgaaagcgcctgcggtacaggggggagagtccttg
atgttagccaatgcctcggatgtgtcgcattttgggttcttccagcgccaggccgcgaag
gaatttattctgtttgcatcgcgaactatatctggaaggactcctcttggacagcgccag
tcaattgaacaggatgagtatgtggtgcactgctacaatcgaagtgggctttgcgggcta
gtctttgctgataaagagtaccccctaaggagtgctttctctgttatcaacaaggtctta
gatgagtatcagaggacttttggtgattcatggaagattaagaacacggacagcaccgat
gcatggccttacttaccagaagctcttgcaaaataccagaatcctactgaggctgacaaa
ttggccaagattcaaaaagacttggacgagacaaaagtcatactgcataaaacaatcgaa
agtgtgcttaaacgtggggagaatcttgataatctcgttgacaagagtaacgatttaagc
tccgcttctcagatgttctacaagcaagccaagaaggctaatcagtgctgcaccatttta
taa
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