Physcomitrium patens (spreading earthmoss): 112278424
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Entry
112278424 CDS
T01041
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112278424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112278424
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112278424
mRNA degradation factors
5'-3' decay
Decapping complex
112278424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
112278424
NCBI-ProteinID:
XP_024367671
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All DBs
Position
27:921752..926000
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AA seq
358 aa
AA seq
DB search
MAQNGKPLPPQLDQNSTKELNLTVLQRTDRHVEDILTTAAHVTFYQFDTDANQWSRKDVE
GSLFVVKRRTQPRFQFIVMNRRSTDNLVENLLGDFEYEVQSPYLLYRNAVQEINAIWFYN
ARECEDVANLFQRILHAFKPPPKPRLIPPSSDYVELEAVPTTVNLEGPLERGPIASSGML
EMQDEPLERFLNIVRISTPDITPTTASRPPINHSVQSRTTIPASPTFSAVSMSSIISPTT
TALPLTSLAPLSLDTPDNPPTGRATLIKPSFFVPPPLSSGHSAPSAPLVPSTTSLQPSHG
APLLQPFPPPNPPLSLAPTMQHSVSITKDGVREALNRLVKNEHFIDMVYREMMNAHNF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaatgggaagccgctgcccccgcagctggatcagaacagcaccaaggagctg
aatctaaccgtcttgcagcggaccgaccgccatgtagaggatattttgaccactgccgct
catgtcaccttctaccagttcgatacggatgccaaccaatggagtcgcaaggatgtggag
ggttcactctttgttgtaaaaaggcggacacagccgcggttccagttcatagtgatgaat
cgtcgcagtacagacaatttggtggaaaatctattgggtgattttgagtacgaggtgcaa
tccccgtatcttctataccggaatgccgttcaggaaataaatgccatctggttttacaac
gcgcgggagtgtgaagatgttgctaaccttttccagaggatcttgcacgcctttaaacct
cctccgaaaccacggctgattcccccaagctcagattatgtggaacttgaagcagtccct
acaacagttaacttggaaggtccattggagcggggccctatcgcttcctcagggatgctc
gagatgcaggatgagccactggagcgtttcttgaacatagtgcgcatcagtacacctgat
attactcccacaacagcatctcgtcctccaataaatcattcagtgcaatctcgcacgact
atacctgcttctccgactttttccgcagtgtcgatgtcttccataatatcgccaactaca
acggcccttccgctcacgtctcttgctcctctgtctcttgatacgcctgataacccccct
acaggtcgcgcaacgctcataaagccatccttctttgttcctcccccactctcttctggt
cacagcgcccctagtgcccctctggttccttccacaacttctcttcagccatctcatggt
gctccgttacttcaaccctttcctcctccgaatcctcctctttcgcttgctccaactatg
caacatagtgtatcaataactaaggacggagttcgagaagcacttaatcgcctcgtcaag
aatgagcatttcatagatatggtgtaccgagagatgatgaatgcacacaatttttga
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