Physcomitrium patens (spreading earthmoss): 112278456
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Entry
112278456 CDS
T01041
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppp03021
]
112278456
Transcription machinery [BR:
ppp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112278456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
112278456
NCBI-ProteinID:
XP_024367761
LinkDB
All DBs
Position
27:complement(1621245..1632359)
Genome browser
AA seq
1580 aa
AA seq
DB search
MEESSGGVSMNMNSIRIAVQNLFNLYLGRSLLEKADGNRGENLSLAVRKRVAAVSRPQAP
KEDQFSSDFLMLQSQFTDQEQGRLVTETVLATLLVQCCSHGVQSDFLLSCLQILVKMGFV
RWDSFLHILLRAAEKAENIGQATGSHQGMNVGVTGPQLTGPLAMMMQGTTATPASTPASP
SPSSNLLTSSAHGNVAASPAHSGVEYSSVNPSSNGGTGASGTSIINSLRPLVCRVMLAAL
DNELKPVTCLDILLHVAQWIQTWDAEVDGKEDESKSRLNSWKLKSKMWIHSCVEVIWALI
DENKCRVPFYALLHDKTQLQVERWPDDEALFALFLEVHRRRDKIALHMLPLDQHLHCPTF
ATLRVSSLTYPGTMGELLHGEDVATAIPKGSVEWEKAMRCLRQALRACVSTDWWKKVLVL
APRFKKAPQSMGPRTGSLFVGQPSLEFSADMTCDAVVERIMELMQPLPTGSTNSTVTEAG
RWQEWLMFADLFYFFMSTSCLDFLELIDKLSLRFANGTVMASNHVTWLLAQVFRLEIVTS
ALSSESQVETARKILSFNMAERSVEQTSNTTAQALLLDFVGSSQTLRLWSINRNMMENLH
GNRVQEHMQKGKVIDEWWKQVMKGEWVLDYAQLDEKAMGMVWVLSNTMTQPISEALMIWF
RSSGLSEIILQGERLSVIHETRPLPMTLLSGLSLHLCLRLLTQIEELIFAGQFIPSIAMV
ETYVRLLLAAPQNLFRHHLNGMAHRFQSGMTKPAVSLLLLELFNYRLLPLYRFHNKLKQL
IFDIAKIIITVKVKRGEHRLFRLAENLGINLILNMKDVLLVKKELKGATTEFTETLNRIM
VLNLAFTMKTRGIADFEQMIILKPALEQILASINHTWSEKTMRHFPPLLREALANRIDTR
AHVIQSWQQAEHTVMSHCRQLLSANSDPSYVSQYIQHSLPAHRQFLCAGAWMSMDFERPD
SISIANLGRTLKEFSPEEVTTNVYMMVDVLLHHIHVQLQHGHSLQNLLLATSAGLAHFMW
NQELLPFDIVLLALTDRDDDAHALRLVVGLLLDRPEFQQRVQTYYVHRGQTEHWMQLGPF
QRPEYPQALGSHLAGKDRFPLFFDDMCLRALPVIPLIVYRLIENDATETAERLLHVYTPL
IFYHPTRFSFVRDTLAYFYGHLPTKLVRRLLGSLDLPKIPFSETFLQQIKAFNTGSSPSY
EYFHNLLVGLVNNVIPPLHGKPGTSATGGDGLLSSRFVLNRNQAAASTANNTTEVNKAFY
LHQDPGSYNQLLLETAVVELLSLPPPPNQIVAMLIHIAVKLPTSFPQGGPPKTPQSPSSG
GEALSGQSSSGLNNSSPQFTHSPLMIQACGLLLAQLPVAFHGAIYSETARIIKKDCWWLT
DPSKQSRDLDAIFGYSTWDPSWGARDDTATVIANTVTLLHTLQSNLPFEWLEGMHSVITQ
QRPFVSVVHLRLAYRIMGPLLPRLLSRPLFAKTLALLFTILADVFGRNSQVPSATEATDI
VDLVDFLHHAVMMEVQATGQAGGRPRPETLVLCSKAVERLRPDVQLLFRHLSPDGASSIY
AATHPKLQRPGSSSLMGSVM
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagctcaggcggcgtctccatgaacatgaacagcatccggatcgccgtccag
aaccttttcaacttgtacttgggacggagcttacttgaaaaagctgatggtaatcggggg
gaaaatctgtcattggctgttcggaaacgagtggcagctgttagcagacctcaggctcct
aaagaagatcaattttcgtccgattttttgatgttgcagtcccaatttacggatcaagaa
caagggcggcttgtgaccgagacagtcttggcaactttgttagtacaatgttgcagccat
ggtgtgcagtcagattttctgttatcttgcctgcaaatattggtcaagatggggtttgtc
cgatgggactcctttctgcatatcctgctgcgggctgctgaaaaagctgaaaacattgga
caagcaacggggagtcaccagggtatgaatgttggggtaacggggcctcaactaactgga
cccctggcaatgatgatgcagggcacaaccgcgacccctgcctctacccctgcttcaccg
tctccgtcctctaatctactgacatcgtctgcacatggaaatgttgcagcatctcctgct
cattcaggtgtcgagtactcctctgtaaacccatcctccaacggtgggacaggtgcctca
gggacaagtataataaattcgttgcgacctttagtgtgtcgagtgatgcttgctgccctg
gataatgagctgaagccagtaacctgcttggatattctcttacatgttgctcagtggatc
caaacctgggatgctgaagtggatggtaaggaggatgagagcaaaagcaggttaaacagt
tggaagctgaagtcaaaaatgtggatacacagctgtgtggaagtgatttgggctttaata
gatgagaacaagtgccgtgttcccttttatgcgctattgcacgacaagacccagctacag
gtggagcgatggccagacgacgaggcattatttgctttgttcttagaagtacaccgcagg
cgtgacaagattgctctgcatatgctgccattagaccagcacttgcactgccccacattt
gcaactttgcgagtttcttctctgacttatcctggtacgatgggcgaactccttcacggc
gaggacgttgctacagcgataccgaaggggagtgtggagtgggaaaaggctatgcggtgc
ttacgacaagctcttcgtgcgtgtgtttcaactgactggtggaagaaagttctagttctt
gctcctcgttttaagaaagcaccccagtctatgggacctagaacaggttccctgttcgtg
ggtcagccttcgcttgagttttcagcagatatgacttgtgatgccgtagttgaacgtatc
atggagctcatgcagccactaccaacaggcagcacaaattcaacggttaccgaagcaggt
cgttggcaggagtggttgatgtttgcagatctattctacttttttatgagcaccagttgt
ctcgactttctagagctgattgacaagctctccctgcgctttgcgaatggaaccgtaatg
gctagcaaccatgtgacgtggcttttagctcaagtattccgccttgagatagttacttct
gcactaagctctgagtcacaggtggagacagctcgaaagattctatctttcaatatggct
gagcgttctgtggagcaaacaagtaatacgacggcacaagcgttgctcttggacttcgtt
ggtagcagtcagactttacgcctgtggtctatcaaccgcaacatgatggagaatcttcat
ggtaaccgagtacaggagcacatgcagaagggcaaggttattgacgaatggtggaaacag
gttatgaaaggagaatgggtgcttgactatgcacagttagacgaaaaggcaatgggaatg
gtgtgggtactttccaataccatgactcaacctattagtgaggctctgatgatatggttt
agatcaagtggcttatctgaaattatactgcaaggagagcggctttctgtgatccatgaa
acaagacctttacccatgactctactgtctggtctatcgctgcacctatgtcttcgcctt
ctaacccagatcgaggagctcatttttgctggccagtttattccaagtatagccatggtg
gaaacctatgtgcgacttttattggctgctccacaaaatctattccggcatcatcttaat
gggatggcgcatagatttcaatcagggatgacaaagcctgctgtttctcttcttctgctt
gagttgttcaactaccgactgttacctctatatcgatttcataataagttgaagcaactc
atatttgacatcgcaaaaatcatcataactgtgaaggtcaagagaggagagcatcgactt
tttcgtttggctgaaaatctagggatcaacctcattctcaacatgaaagatgtcttgctg
gtgaagaaagaattaaagggggctaccacagagttcacggaaactctgaacaggatcatg
gtcttgaacttggcgtttacaatgaagaccagaggtatagcagacttcgaacagatgata
atactgaagccagcgctggagcaaatactcgccagcatcaatcacacatggtctgagaaa
actatgcggcatttccccccccttcttcgggaggccttagcaaaccggatagatacacgg
gctcacgttattcaaagttggcagcaggctgaacataccgtcatgtctcactgtcgtcaa
ttgctatcagccaattcagatccaagttacgtatctcaatatatccaacatagccttcct
gcacatcgacagttcctatgcgcaggtgcctggatgtcgatggattttgaacgtcctgat
agtatcagcattgcaaatcttggtcgaacactgaaagaattttcgccagaagaagtcact
actaatgtatatatgatggtggatgtactgcttcaccacattcatgtgcaactccagcat
ggtcactctctgcagaacttgctacttgcaaccagtgccgggcttgcacactttatgtgg
aatcaagaactgctgccatttgacattgtgttactagcccttacagatagagatgatgat
gctcatgctctgcgcttggtggtgggtttgctcttagaccggccggaatttcagcaacgt
gttcagacttactacgttcatcgaggtcaaacggagcattggatgcagttaggaccattt
cagcgtccagaataccctcaggctcttggttctcacctcgctggcaaagacaggtttccg
ttgttttttgacgacatgtgtcttcgcgcattaccagtcatacccttgatagtataccgg
ttaatagagaacgacgcgacagaaactgcggagcgcttgcttcatgtttacactccgctc
attttctatcatccaacccgtttctcctttgtccgggatacacttgcttacttttatggg
catctgccgactaagcttgtgcgtcgccttctcggcagtctggacctacccaagatacct
ttttctgagacttttcttcagcaaatcaaggcattcaacacaggaagcagtccctcatac
gagtacttccacaacctactcgtgggtctggttaacaatgtcataccacctttgcatggc
aagccaggaacaagcgcgacaggtggtgatggtcttttatcgtcccgctttgtgttgaat
aggaaccaagctgctgctagtactgccaacaatactacagaagtaaacaaggctttctac
ctgcatcaagatccaggttcctacaatcagttgttactagaaactgcagtggttgagcta
ctctctttacctcctcccccaaaccaaatagttgctatgcttatccacattgcagtcaag
cttcctacctcatttccccaaggtggacctcccaaaaccccgcaatctccttcaagtggt
ggagaggccttgtcaggacaaagttcttcagggttgaacaactcctcgcctcagtttacg
cactctcctctcatgatacaagcgtgtggcctcctcttagcacagctaccagtcgcgttt
catggtgctatatattcagaaaccgctcgtatcataaaaaaggactgttggtggttaact
gatccttctaagcaatcaagagatcttgatgctatttttggttattcaacttgggatcca
agttggggcgctcgagatgacacagctaccgtcattgcaaacactgtgacattgctgcat
acactgcagtccaatttgccattcgaatggcttgagggtatgcactcagtgattacacag
cagagaccgtttgtctccgtagttcatctgcgactggcgtataggataatggggcctttg
ttgcctcgtctgctctcacgtccactgtttgccaagactcttgcacttctcttcaccatc
ttggcagatgtatttggtcgcaattctcaagttccctcagcaactgaagccactgatatc
gttgaccttgtcgattttctgcatcacgctgtgatgatggaagtgcaagcgacaggccaa
gcaggaggacgacctagacctgagacattagtgctctgctccaaagctgttgagcgccta
cggccggatgtgcaactcttgttccgacatctgagtcctgatggagcctcctccatctac
gctgccacccatcccaagcttcaaagacctggatcctcctcactcatgggtagtgttatg
taa
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