Physcomitrium patens (spreading earthmoss): 112278970
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Entry
112278970 CDS
T01041
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00040
Pentose and glucuronate interconversions
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112278970
Enzymes [BR:
ppp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112278970
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112278970
NCBI-ProteinID:
XP_024368715
UniProt:
A0A2K1LAY9
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Position
1:24643342..24645684
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AA seq
516 aa
AA seq
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MTMARLTVSLVVLILVCAPLGRVLSQEEFQVLPDTSFAATEPNQSNAFDDEPAFAAEDST
FGGDDEIAAAPEPESQASDSTSYDTSDLESDAQLNVSREETNSGESTDDTLVSDNDFGDG
VGNTTSADSDGFDMIENDDNSSSQDSREDFGAASFSSRGACSTGNPVDDCWRCDPNWASY
RQRLASCAIGFGRSAIGGKNGRIYVVTSSRDDNPANPARGTLRYAVTRPGPLWITFAYSM
TIHLKNELLITSYKTIDGRGVTVRIAGGAGLTMQRVSNIIVHGIAIHDIKPTGPARIMSS
TSHVGSRGRTDGDAISIFSSKNIWIDHCYLARAADGLIDVIRGSSGVSITNNYFTQHDKV
MLLGANKEHWEDRNMYVTVAYNTFGPGLIQRMPRVRFGNVHVVNNDYTSGWGIYAIAGSE
GPTILSQGNIFNAYKGSKQVTKRINDGGNNFGGPKNWNWRSEGDRFISGAYFTSVPMKWS
YQSYSKTASCSARPATMVTRMVRGAGPLSCRRGTRC
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcaaggttgacagtctccctggtggtgttgatcctggtctgcgcgccgtta
gggcgtgtgctctcacaggaagagttccaggtgctgcctgatacttccttcgccgctacc
gagccgaatcagagtaacgcgttcgacgacgaacctgctttcgctgctgaagactctacc
tttgggggtgacgatgagattgctgctgctcctgagcctgagagccaggcatctgattct
acaagttatgataccagtgatttggagtcagatgcgcaactgaacgtctccagagaggag
actaactctggtgaaagcaccgatgatacactggtctctgataatgacttcggggatggt
gttgggaacaccacttcggcggactctgatgggtttgatatgatcgagaacgatgacaac
tcttcatcacaagattccagggaggattttggtgccgcatctttcagctccagaggggca
tgctcaacgggaaaccccgtcgacgattgttggaggtgtgatccaaactgggcatcgtac
cgccagcgccttgctagctgcgcaattgggttcggaagaagtgccatcggtggcaagaat
ggcaggatttacgtcgtcacctcttctcgcgatgacaaccccgcaaatcctgctagggga
accctccgttacgctgtcacccgacctgggcccctctggatcaccttcgcgtacagcatg
actattcacctgaaaaatgagctgctaatcaccagctacaaaactatcgacggccgtggt
gtgacagtccgcattgcaggaggtgctggtttgacgatgcagcgggtaagcaacatcata
gtgcacggaattgctatccatgacatcaaaccaacaggacctgcaaggattatgagctct
accagtcatgtgggcagccgtggcagaaccgacggtgatgctatctccatcttctcctca
aagaatatctggatcgaccactgctaccttgccagagctgctgacggtctgatcgacgtg
atcagaggctcctctggcgtgtccatcacgaacaattacttcactcagcacgacaaagtg
atgctccttggagccaacaaggagcactgggaggatcgaaacatgtatgtgacagtggct
tacaataccttcggtcctggactgatacagaggatgccgagagtgcgattcggaaacgtc
catgttgtgaacaacgattacacttctggatggggaatttatgccatagctggaagcgaa
gggcctacgattctctctcagggcaacatattcaacgcctataagggctccaaacaagtg
acgaagcgtatcaacgacggtggaaacaatttcggaggccctaagaactggaactggaga
tcagagggtgacaggtttatttctggtgcctactttactagtgtgccgatgaaatggtcc
tatcagagctattctaagactgcaagctgctctgctcggccagcaacgatggtaaccagg
atggtaagaggcgccggtcctcttagttgccggcgtggtactcgctgctag
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