Physcomitrium patens (spreading earthmoss): 112279033
Help
Entry
112279033 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112279033
03036 Chromosome and associated proteins [BR:
ppp03036
]
112279033
Spliceosome [BR:
ppp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112279033
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
112279033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
DUF7131
Motif
Other DBs
NCBI-GeneID:
112279033
NCBI-ProteinID:
XP_024368842
LinkDB
All DBs
Position
2:14575636..14583802
Genome browser
AA seq
867 aa
AA seq
DB search
MASSDDEPENPMPVPSNDSPDSGSESDSDLDDDEDDQATALLLQRLQAQVNESNSYEAHV
NYIDALRKAAELEKLRLARESMNAVFPLTPNMWLEWCEDESRLATSRGAVPAVEALYERG
VKEYLSIPLWLQYLEFVEERDTSVADCTEPGIAKMRALFERALTSTGLHFTEGGKVWEAY
RDYESALLLSMAEASPEAKSKQVEILRSLFHRQLRVPLVDHAQTLEQYKDWEQQQGVQIG
ADNDDLSGLPGGVASAYKTAEQMSKARGLFENNITAEKPVDGDLLQHYLEYISVEEATGD
PARAQILYERALSVFPVTHEVWLKYTHYLDVNLKVASVLRSVYARAVRNCPWVGALWTKY
MLALERAAAPETELSVVFETALGCGFQSPNEYEEVYSTRAHGLRRRIMAADANSDQTSNF
TLLHDTFERGTEFLSTYFPDHVNHNIRLWTYWAHLEATLLKDITAARGVWENLIKTHGWM
LEVWQNYISMELLLGNVKEARTLYKRCYSRRLEGTGTQVMCAAWLRFEEEHGALEDYDRA
VLKVGPRVAEVQNLQTQQEQKQSTGTERVKMESRPQPSDKVKPKSDVKSRSSKITDNASK
TSGRKRGLGNAESENAVKRQKVPKVTAQDTDQPGASETAAGIVTGMEEAERTEQKSENAS
RELPKQVKELNKAVVFTDECTAFLSNVAFEVTEEDLKEFFSPSSRVKEVRILRERGTARP
RGLAYVDFEDEESLTAAIAKNKEELKGRQLSIARSDPKGGRGGGRGSGSSRRGRTSALGR
GGGRGGIGGSDSSNALGGGRGLAGPPTVGHRRGGHLKLTGSNTFAVPRNVPRPLGWGNPL
ATSSSNASGGEVPKSNTEFREMFLKQS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgacgatgagcctgaaaatccaatgcccgtcccgtctaacgattcccct
gactccggctccgagtctgattccgacctcgatgacgatgaggatgatcaggccactgcc
ttgctgctgcagcgcctccaggcccaagtgaacgagtccaattcctacgaggctcatgtt
aattacattgacgcacttcgaaaggcggcagaattggagaagcttcggctagcaagggaa
tctatgaatgcggtctttcctttaactcctaacatgtggttagaatggtgtgaagacgag
tcacgtttagcaaccagccgtggagcagttccagcagtagaggctttgtacgagcgcggt
gtcaaagagtatttatctattcccctgtggctacaatatctcgagtttgtggaagaacgg
gacacgtctgttgctgactgcactgaacctgggatagctaaaatgagggcactctttgaa
cgggcgctgacttcaactgggttgcatttcaccgaaggaggaaaggtttgggaggcttat
cgtgattatgaatcagctctcctgcttagtatggccgaagcaagtcctgaggcaaaaagc
aagcaggttgagatcttaagaagcttgtttcatcgtcagttgcgagttcctttagtagat
catgcccagactctggagcaatacaaggactgggagcaacagcaaggtgtccaaattggg
gctgacaatgatgatctctctggccttcctggaggtgtggcatctgcatacaagacggca
gagcagatgagcaaggcacgaggattgtttgaaaataacataacggctgagaagcctgtt
gatggtgacttgcttcagcattacttggaatacatcagcgttgaggaggcaacaggtgat
ccagctcgcgctcagatactgtacgagcgtgctttatctgtcttccctgttactcatgaa
gtttggctcaaatatactcattatcttgacgtcaacctcaaggtagcatctgtattaagg
agtgtgtatgctcgagctgtgcggaattgtccttgggttggtgctttgtggaccaaatat
atgctagctcttgaacgagcagctgctccagaaacagaactatcagtagtatttgaaact
gcactagggtgtggatttcagtcaccaaatgagtatgaggaggtatactctacgagggct
catgggctaaggcgacggattatggcagcagatgcaaattctgatcagacttccaatttt
acacttttgcatgatacatttgagcgtggaacggaatttttgtctacttacttcccggat
catgtaaatcataacataagactgtggacctattgggctcatttggaagctacattgcta
aaggacataacagcagctcgtggtgtttgggagaacctgataaagactcatggttggatg
ttagaggtgtggcaaaattacatttccatggagctgctccttgggaatgtgaaggaggca
agaactttatataagcgctgctacagccgcaggctagagggtactggaacacaggtcatg
tgtgctgcatggttgcgcttcgaagaagaacatggtgctctggaagactatgaccgggct
gtgttgaaggttggccctagggttgcggaggttcagaatttgcagacccaacaggagcaa
aagcagtcaacaggaacagaaagagtgaagatggaatccaggcctcagccgtcggataaa
gttaaacctaaaagtgatgtcaaaagcagatcatccaagataactgacaacgcatctaaa
acgagcggcagaaaaagaggacttggaaacgcagaatcagagaacgccgtgaaacgtcag
aaagttcccaaggttactgctcaagacaccgatcaaccaggggcttcagaaacagcagct
ggcatagttacaggaatggaagaagcagagcgaacggagcaaaagtcggaaaatgcatca
agagaacttccaaaacaagtgaaggagttgaacaaggcagttgttttcacggacgagtgt
actgcatttttgtctaatgtagcatttgaagtgactgaggaggatcttaaggaattcttt
tctccctcttctcgagtcaaagaagttcgtatactgcgggaacgtggcactgcaagacct
cgagggcttgcgtatgtcgattttgaagacgaagagtctctaactgcagctatagccaaa
aataaagaggaactcaaagggcgacaactgagcattgctcgttcagatcccaaaggaggt
cgtggtggaggtcgaggctctggatccagtcgccgtggaagaacaagtgccctcgggcgc
ggtgggggtcgtggaggcataggaggaagtgattcaagcaacgcccttggaggtggtcga
ggtttggctggacctccaacagtcggacatcgtcgtggtggtcatctgaaacttacaggt
tccaacacgtttgctgtgccacgaaatgtacctcgacctttaggttggggcaatccccta
gccactagttcctcgaatgccagtggaggtgaagtgcccaagtcgaatacagaatttcga
gaaatgtttctgaagcaaagctga
DBGET
integrated database retrieval system
