KEGG   Physcomitrium patens (spreading earthmoss): 112279039
Entry
112279039         CDS       T01041                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppp04131]
    112279039
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppp04147]
    112279039
Membrane trafficking [BR:ppp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    112279039
Exosome [BR:ppp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112279039
  Exosomal proteins of bladder cancer cells
   112279039
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 WD40_CDC20-Fz TPR_COPA_B EIF3I Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st ENTH Zn_ribbon_3 DUF6956
Other DBs
NCBI-GeneID: 112279039
NCBI-ProteinID: XP_024368861
UniProt: A0A2K1L2U3
LinkDB
Position
2:complement(16204736..16210744)
AA seq 1221 aa
MLTKFETKSNRVKGLSFHPRRPWILASLHSGIIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMRRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHIKEDLVVSASLDQTVRVWDIGALKKKSVSPADDMMR
LTQMNTDLFGGGDSVVKYVLEGHDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHVNNVSCVMFHARQDIIVSNSEDKSIRVWDMSKRTGVQTFRREHDRFWILSAHP
EVNLLAAGHDSGMIVFKLERERPACAVQGGTLYYVKERYLRTYDFAAGKDNPLISIRRAG
SMGLNLGPRSLSYNPAENAVLLCSDVDGGSYELYIIPKESSGRSEAAQEAKRGLGSSAVF
VARNRFAVLDKNQNQVLIKNLRNEVTKKVTLPSPSTDVIFYAGTGNLLCRSEDKVVLFDL
QQRATLGEVSSPFVKYVVWSSDMENVALLSKHAIVVATKKLVHKYTVHETIRVKSGAWDE
SGVFIYTTLNHIKYCLPNGDSGIIRTLDVPVYITKVSGNSIYCLDRDGKNRVMQIDATEY
TFKLALIQRKFDQVLNMIQSLQLCGQSIIAYLQQKGFPEVALHFVKDEQTRFNLAVECGN
TEVAVASAKEIDQKDCWHRLGVEALRQGNHEIVEYAYQKTKNFERLSFLYLITGNVEKLG
KMLKIAEMRNDVMGRFHNALYLGDVQERVRILEETNHLPLAYATAKVHGLTEIAEELERQ
LGDNVPSLSEVDKSVLLMPPRPILQENNWPLLVVNKGLFEGAFPGAVATADIEDEDVAAG
AWGPEIDIVEPEEGFNGEAVIVDEEVIGDEEERGDDEEGGWDNLDLDIPADAAVPEVSHE
AAYFVTPSAGIPKSQNWIQNSSLAGEHAAAGSFDSAMRLLSRQLGIQNFTPLRNVFLELH
LASQALLPTLVSVPGLSLFLERGWTDSSPINAKGSPAILTKLSSLEEKLNVAYKATTDGK
FTDALRFFLDILHTIPVVVVDSRKEVDEVKELLGIAKEYTLALKIELKRKDPALKDDLKR
QCELSAYFTHCQMQPTHLKLSLMSAMTICFKSKNYSTAASIARRLLELNLSPAMASKARQ
VLQVSERNPKNEIELNYDPRNPFVVCGATFTPIYRGTKDVSCPYCKARFVPDTANKLCPV
CDLALVGADASGLLCSTSQMR
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgttgaccaagttcgagacgaagagtaacagggtgaaggggctgagctttcacccgcgg
cggccatggattcttgccagtctgcacagcggtattattcagctgtgggactaccgaatg
gggacgctcattgaccgattcgatgagcatgatgggccagtcaggggcgtccatttccac
aagtcgcagcccctgtttgtatctggaggggatgattacaagataaaggtatggaactac
aagatgcggcgatgtctgttcactttgttgggtcacctcgattacatccggacggtacaa
ttccatcatgaaagtccgtggattgtgagtgctagcgatgatcagaccatccgcatctgg
aactggcaatctcgcacatgtatttctgtactcaccgggcacaatcattacgtgatgtgc
gcatcctttcacattaaggaggatttagtggtatctgcatcattagatcagactgtgcgg
gtttgggatataggagcattgaagaagaaatccgtgtctccagcggatgatatgatgcga
ctcacccagatgaacacggatcttttcggaggaggtgattccgtggtgaagtatgttcta
gaaggtcacgacaggggtgtcaactgggcatcattccatccctctttgccgctaattgtt
tctggagcagatgatcgtcaagtgaagctttggagaatgaacgatacaaaggcatgggag
gtggatactctgcgggggcacgtaaacaacgtttcttgcgtcatgtttcacgcgcgccaa
gacatcattgtgtcaaactccgaagacaagagcattcgtgtgtgggacatgtcgaagcgc
actggtgttcagaccttccgaagagagcatgatcggttctggattctgtctgcccatcca
gaggtgaaccttcttgctgctggtcatgatagtggaatgatcgtcttcaagctggagaga
gagagacctgcttgtgcggttcaagggggcactttatactacgtgaaggagcgctatttg
cgcacttacgattttgctgctggaaaggacaaccctcttatttccattcggcgagcaggg
tccatgggtctcaatctgggcccgcgatccctttcatacaacccagctgagaatgcagtt
ttattatgttcagatgttgatggtggttcttatgagctctatatcatccctaaggagagc
tctggcaggagtgaggcagctcaggaggcaaaacgtggtttaggttcgtcagctgtcttt
gtggcaagaaacagatttgctgtcctggataagaaccaaaaccaggttcttatcaagaat
ctgagaaatgaagtgaccaagaaagtaactcttccttctccaagcacagatgtgatcttt
tatgcgggaactggcaaccttctttgtaggtcagaggacaaagtcgtgctctttgatctt
cagcaacgtgccacactgggagaggtcagctctccttttgtgaagtatgtggtctggtct
agcgacatggagaacgttgcattgcttagcaagcatgccatagttgtggccaccaagaag
cttgtgcataaatacactgttcatgagactattcgtgtgaagagtggcgcatgggatgag
tctggtgtgttcatatacaccaccctcaaccacatcaaatattgcttgccaaatggagat
agcggaataattcggacactagacgtcccagtgtacatcacgaaagtcagcggaaactca
atctactgcttggatcgggatggcaagaaccgagtgatgcagattgacgctactgagtat
acatttaagctagcactcatccagcgcaagtttgatcaggtgttgaacatgatccaaagc
ttgcaactatgtggacagtccataattgcatatctgcagcagaaaggatttccggaggtt
gccttgcactttgtaaaagatgaacagactcgcttcaacttagctgttgagtgcggcaac
accgaagttgctgtggcatcagccaaggaaattgatcagaaggattgctggcaccgcctt
ggtgtagaggccctacgccaggggaaccacgagattgttgagtatgcataccagaagaca
aagaactttgagagactttctttcttgtatcttataactggtaatgtggagaagctcgga
aagatgctgaagattgcagaaatgcgtaatgatgtcatggggcgcttccacaatgcactt
taccttggggatgttcaagaaagagtgaggattttggaggaaactaaccacttaccttta
gcgtatgctacggccaaagttcatgggttgacagaaatagccgaagagttggaaagacag
cttggtgacaatgttccttctctctctgaggtagacaagtccgttttgttaatgcctcca
agacccattcttcaggaaaacaactggccgttgttggtggtcaacaagggtctctttgag
ggtgcttttccaggagctgttgcaacagctgacatagaagatgaggatgtagctgcaggg
gcttggggaccagaaatagatattgttgagccagaggagggtttcaatggagaggcagtg
attgttgacgaagaagtgattggggatgaagaagagaggggtgatgatgaggaaggaggc
tgggacaatttggatctagatattccagctgatgcggccgtacctgaagtttcacatgag
gctgcctattttgttactccttccgcaggaattccaaaaagtcaaaactggattcagaac
tcgtctctcgcaggagaacatgctgctgctggctctttcgattcagctatgaggctgcta
agtcgtcagcttggaatccagaacttcacacctttgaggaatgttttcttggaacttcat
ttggcaagtcaggccctgctaccgactttagtatctgtaccaggactatccctgtttttg
gagcgaggatggactgatagttcacccatcaatgccaagggatcacctgctattttgacg
aagctttcctctcttgaagagaagctgaacgttgcatacaaggcaactacggatgggaag
ttcactgatgctcttcggttcttcctggatattttgcacacaatccctgttgttgttgtg
gattctcgcaaggaagtggatgaggtgaaagagcttcttgggattgctaaggagtacact
cttgcgcttaaaattgaactgaagaggaaagatccggcattgaaagatgatttgaagcgc
caatgtgaactttctgcttatttcacgcactgtcagatgcaacccactcatttgaagcta
agtttgatgtcagctatgacaatatgtttcaagtccaagaactacagcaccgctgcctcc
atcgcacgaagactcctagaattgaacttgtccccggctatggcaagcaaggctcgccag
gtcttgcaagtgagtgaaagaaaccctaagaatgagattgagctaaactatgatcctcga
aaccccttcgtcgtctgtggagctacgttcactccaatttaccgtggcaccaaggatgtt
tcatgcccatactgcaaagcacgttttgttccagacactgcaaacaagctgtgccctgtt
tgcgatcttgctctggttggggctgatgcctcaggcctactgtgctctacttcccagatg
cgttaa

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