Physcomitrium patens (spreading earthmoss): 112279082
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Entry
112279082 CDS
T01041
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112279082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112279082
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112279082
03012 Translation factors [BR:
ppp03012
]
112279082
04131 Membrane trafficking [BR:
ppp04131
]
112279082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112279082
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112279082
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112279082
Translation factors [BR:
ppp03012
]
Eukaryotic type
Elongation factors
112279082
Membrane trafficking [BR:
ppp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112279082
Exosome [BR:
ppp04147
]
Exosomal proteins
Proteins found in most exosomes
112279082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
FcpA
AAA_22
DUF34_NIF3
Semialdhyde_dhC
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112279082
NCBI-ProteinID:
XP_024368956
LinkDB
All DBs
Position
2:complement(4439133..4441571)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETVKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARFDEISKEVSTYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDNVSEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIRPGMLVCFAPTGLTTEVKSVEMHHESMPEAHPGDNVGFNV
KNVAVKDLKRGYVASDSKNDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKVDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMTVETFAEYPPLGRFAVRDMRQT
VAVGVIKAVEKKEPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaaggtacacatcaacatcgtggtcattggccatgtcgactccggaaaa
tcgaccaccactggtcatcttatctacaagctgggaggaatcgacaagcgtgtgattgag
cgtttcgagaaggaagcggcggagatgaacaagcgttctttcaagtatgcgtgggtgttg
gacaagctcaaggccgagcgtgagcgtggtatcacaattgacattgctctgtggaagttc
gagacagtgaaatactactgtactgtgattgatgctcccggacatcgtgatttcatcaag
aacatgatcacgggtacctcccaggctgactgcgcggttctcatcattgactctaccacc
ggaggttttgaagctggtatttccaaggatggacagacccgtgagcacgctctgttggct
ttcaccttgggagtgaagcagatgatatgctgctgcaacaagatggacgctaccacgccg
aagtacagcaaggctcgattcgatgagatcagcaaggaggtgtcgacttacctcaagaag
gtcggttacaaccccgacaagatccccttcgtgcccatctcagggttcgagggtgataac
atgatcgagcgatcgacgaacttggactggtacaagggcccaacccttctcgaggccctg
gacaacgtgtcagagcccaagaggccgtccgacaaacccctgcggttgccccttcaggat
gtctacaagattggaggtattggaactgtgccagtgggacgtgtggagactggaatcatc
aggccgggtatgttggtgtgctttgcacccactggactgacgactgaggtgaagtcggta
gagatgcaccacgagtcgatgcctgaggctcaccccggagacaacgtcgggttcaacgtg
aagaacgtggcggtgaaggacctgaagagaggatacgtggcttcggactcgaagaacgac
cctgcgaaggaagcagccaacttcactgcccaggttatcatcatgaaccacccgggacag
atcggaaacggttacgcgccggtgctggactgccacacctctcacattgctgtgaagttt
gccgagatcttgacgaaggtggacaggcgatcgggtaaggagctggagaaggagcccaag
tttttgaagaacggagacgcagggttcgtaaagatgattccgaccaagcccatgactgtg
gagactttcgcggaatacccgccattgggacgtttcgccgtgcgtgacatgagacagacg
gtggccgtaggtgttatcaaggccgtggagaagaaggaaccaactggtgcgaaggttact
aaggccgctgccaagaagaagtga
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