Physcomitrium patens (spreading earthmoss): 112279270
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Entry
112279270 CDS
T01041
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1 isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04130
SNARE interactions in vesicular transport
ppp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112279270
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112279270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112279270
Membrane trafficking [BR:
ppp04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
112279270
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF7800
Motif
Other DBs
NCBI-GeneID:
112279270
NCBI-ProteinID:
XP_024369295
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All DBs
Position
3:8195640..8199145
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AA seq
330 aa
AA seq
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MYIVSPRAGFVSDAPEPLFNFAELLFDERGFSIRGTHRNLDSFDCGPTNAHVWLREGTLL
TVELRESEASIQSETWSVAMVKLTLIARVTDGLPLAEGLDDGREQNDMEFYKQQAKQLCK
ELSRRQHEASRMSVETGPYFFHYIIEGGVCYLTLCERSYPKKLAYQYLEELQREFEKVNR
SQIETVARPYAFIKFDTFIQKTRKLYQDTRTQRNLSKLNDDLYEVTQIMTRNIQEVLGVG
DRLDHIIRINVNKDTDSPPGSKRIFYSIMLREIADLKVSQMSSRLATESKVYSDKAKDLN
RQALIRKWAPVGIVIGVVLLLLWFRRSFWS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtatattgtatctccacgcgctggatttgtttccgacgcacccgaacctttgttcaat
tttgcggagctcctcttcgacgagcgcggattttcaattcggggaacacacaggaatctc
gattcgtttgattgtggcccgacgaacgcacacgtctggctgcgtgaggggacgttgttg
acggttgagctgcgggaaagtgaagcatccattcagagtgaaacctggagtgtagccatg
gtgaagctcactcttattgcgagggtgacggatggcttgccgcttgcagaggggttggac
gatgggcgtgagcagaatgacatggagttttacaagcagcaggccaaacaattgtgcaaa
gagctctctcggcggcagcatgaggcgtctcggatgtctgttgagactggaccttacttt
ttccattacatcatagaagggggtgtgtgttaccttaccctctgtgagcgatcatatcct
aaaaaacttgcgtaccagtatctggaggagctgcaacgggaatttgaaaaggtgaatcgg
tcgcaaatcgagactgtcgcgaggccttatgccttcatcaagtttgatacttttattcaa
aagactaggaagctttatcaggatactcgaactcagaggaatttgtctaagctcaatgat
gatttgtacgaagtcacacaaatcatgacacgcaacattcaagaggttttaggggttgga
gatcgacttgaccatattattaggatcaacgttaataaggatacagactcacctccaggc
tccaaaagaatcttttattcaattatgctacgcgaaatagcagatctgaaggtgagccag
atgtcgagcagacttgccactgaatcaaaagtgtactcagacaaagcaaaagatctgaac
cggcaggctttgataaggaaatgggcacctgttgggattgtaattggggtggttctacta
cttctctggttccgccggtcattctggagttag
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