KEGG   Physcomitrium patens (spreading earthmoss): 112279327
Entry
112279327         CDS       T01041                                 
Name
(RefSeq) protein decapping 5 isoform X1
  KO
K18749  protein LSM14
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppp03019]
    112279327
Messenger RNA biogenesis [BR:ppp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112279327
SSDB
Motif
Pfam: LSM14 FDF SM-ATX LSM GRP
Other DBs
NCBI-GeneID: 112279327
NCBI-ProteinID: XP_024369437
LinkDB
Position
3:complement(22071327..22077189)
AA seq 677 aa
MGRGRGPNTADSYIGSLISLTSKSEIRYEGILYTVDTENSNIALQNVRSFGTEGRKKDGP
QIPASDKVYDYIIFRGSDIKDLQVKSSPPPPLQPPPLPQQTDPAIISLQQSQPQYPPPSS
LGSYNSGLSAAGSSSEPSASPPPPPPPYMGMPSQYPRAVPPLYPPGGMQSWGPPPPPGAN
GSGLAMPMYWQGYYRPPPAGHMQHQPMPPQPPPSLATPPQGQPQQQQQQQHGQQQIQQGQ
QAPSLAQQLPAVSRTPGPVTGASPSGGVTPASQTQASSSNVAAAPMSSPATSVAPLAAEA
SPPASTVMSSTAPTVTTAVTPLASSAGTAASASPSAVSVSAPMQGVSVVITPVAKNPRRP
VANVTQVPQAPSQTVGSSSNGSQSTSSATVVSSGSMVRPQSEAMQSSGIVATAAKSGAVV
AQSQAPPKVRQKPADQENAARAPIVQTSSLAAPAQEQVSQPLLPLPPADQKQQVHSTTVV
FRQRGSHGVPTGQRNHWQGNGYMGNGNYNRRGRGRGNGSGRGMALANPTQQFTEDFDFTA
MNEKFNKDEVWGTLGGKDEEEDYEYENGNAEDEAADTTHLDVSKKALYNKDDFFDSLSCD
ASEGRGERTKFSEQRKIDTETFGAFPVRSRGGRGGRGGRRGGYRGGYYGGGGGSYGIGRG
GGYGRGRGTGRVSTGNL
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggggcgcgggcgagggccgaacacggccgattcctacattggtagcctcattagtctc
acctcgaagagtgagattcggtacgaagggattctgtacactgtggacaccgagaattcc
aacatagcgctgcagaacgtgaggtcattcgggacagaagggcgtaaaaaggatgggccc
caaattccagctagcgataaggtgtacgactacatcatattccgaggatcagatatcaag
gatttgcaagtcaagtcatccccacctcctcccttgcaacctcctcctctacctcaacaa
acagatcctgcaatcatctcacttcagcagtctcagccacaataccctccaccgtcctct
ctggggtcgtacaatagtggactttctgcagcagggtcttcctcggagccgagtgcctct
ccccctcctcctcctcctccttacatggggatgccatctcagtacccgagggcagtgcct
cctctatatcctccagggggaatgcagtcgtggggtcctccaccacctcctggtgccaat
gggtcgggtctggcaatgccaatgtattggcaaggttattacaggccgccaccagcaggg
cacatgcagcaccaacccatgccccctcaacctcctccgtcgttggcaacgcctccacag
ggtcagccacaacaacaacaacaacagcaacatgggcagcagcagatccagcagggtcaa
caagcgccatccctggctcagcagcttccggcagtttcacgtactccaggaccggtaacg
ggggctagccctagcggcggagtaactcctgcttcgcagactcaagcttcatcatcaaat
gttgcagctgcccctatgtctagccctgctacttcagtggcacctttagctgcagaagct
tctcctccagcttctactgtgatgagttccaccgcacctactgtgaccacagcagtcact
ccattagcttcttcggccgggacagcagcttctgcctctccttctgcagtttctgtttct
gctcctatgcaaggagtaagcgtggtgatcacgccagtcgcaaagaacccacgacgtcct
gtggccaatgtgactcaggttccgcaggctccatcacagactgtgggatcctcttctaat
gggtcacagagcacatcaagtgcgaccgtcgtgtcctctgggtccatggtaagaccacaa
agcgaggcaatgcagtcttctggaattgttgctacagctgcaaaatcgggagcagttgtt
gcacaaagtcaagcgcctcccaaagtgaggcagaaaccagcggaccaggaaaatgcagca
agggcacccatagtgcaaactagctcactggctgcacctgcgcaggagcaagtcagtcag
cctctccttccattgccccccgcagatcagaagcaacaggtgcactccaccactgtagtc
tttcggcagcgcggaagccatggcgtacccactggccaaaggaatcactggcagggaaat
ggttacatggggaatggcaactataatcgtcgtggaagaggccgaggcaacggcagcgga
aggggcatggcgctggcgaatcccacgcagcaattcactgaagatttcgacttcacagcc
atgaatgagaagttcaacaaggacgaagtttggggaacgctcggaggaaaggatgaagaa
gaagactacgaatatgaaaacgggaatgcggaagacgaggcagccgataccacacacttg
gatgtttcaaagaaggctctttataacaaggatgattttttcgactctctatcttgcgat
gcatctgaaggacgtggtgaacggaccaaattttctgaacagcgcaagatcgacactgag
acatttggcgccttcccagtgaggtctcgcgggggccgtggtggacgcggaggacgtcgt
ggaggctacaggggcggctactatggtggcggtggtggaagttatgggataggaagaggt
ggtggttatggcaggggccgtggtacaggccgtgtctcaactggcaatttataa

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