Physcomitrium patens (spreading earthmoss): 112279503
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Entry
112279503 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K24155
rabconnectin-3a
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112279503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112279503
Membrane trafficking [BR:
ppp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112279503
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
112279503
RAVE complex
112279503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WD40_CDC20-Fz
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
112279503
NCBI-ProteinID:
XP_024369770
UniProt:
A0A7I4FMZ5
LinkDB
All DBs
Position
3:complement(23068938..23081928)
Genome browser
AA seq
2639 aa
AA seq
DB search
MSSSLPGSPYELSIQQDLPPAPNVGTQCADWLPRFAGSSWLAYAASSAIVIATAASPLNS
GESSSGRFFQQVLETRTNNDGDDCIGRSLVTSVGWAPVGSSVGQLAAACGNTLLLYSPTT
LASATAGSRYSEIPLAWETKQVMQHLFQILTFSWTESGDGLLAAGSNIAMWKRGEAGFSV
LWQVQCTVPQVYAASSWSSAGLAATVDCTLGTHPKSVATKESTIDGETSDSLNSLSGKAT
VWWWWQEAHEIQGIELQHPSEVSMIQWRPSNGCGEDPFTYRPVLLTSSRDGSLRLWLDME
GPSYLSFCFGDSQELRKKPTFSMAAVVDVNKCLNGILGYDIFVTWASENRTRGNSEEKRL
LTRNNSVKRPDLIPCEWLVGVGPRGKVALWSIHSLDDILPTRFPRVTLWQEGDGVLAQPS
TFYPFRMEDADNARDRLMMMKAVVQRPEGAMAVPPSSLDLFEALPSGHFRWSRLWPPVSA
VGTGGGHVGSGTQTSRNKSSWGVSSEVVYLDGHRGAIVQVALHPSPTVALAASVDEQGVI
LLWDLSAWASPQVEVMSSQTLGWKLAGQISGLLNTSLFYQLIAWAPSSLPEGRAILLAGD
LMKIDCFLVGRSDSQRKGVTSVLFDHLYSLHCSTFDKGDHLNAFTAVPMPLNALQQVAEE
RSFLIVGTNRGGSILASWVVELQVTALSDGGQDDKVAAVDTQEVQETERPHSKLQYLEKS
GYTLYGGSLTSQERIYIRGSFVGSANFDADQCVTSIAVVPGFIKGSLSTHLEVYQKAHPY
DVLTGCADGSIRLYKVFCSQAHSVVPQTRSFVWECVGVVRAHCSSVILAAATASGDKFAS
VGDADHKLVKIWEVDGCNDDGDFELESQITFPQAVVALSWMNAGMGCVLLAVATKFDLFI
YAQDRTYSHKGVPKDRVWICLASFLFNTAIDHLFWSFQGSPILASQGHIWVFSPWVCSKT
RLSGYHGYVHSSNGIPQPAARHSCSLLQAAEALVSPLPDYHPRALFWSLFKGNMSRARAC
VRHLAHHLATSAKSTAKRDGTLHSDWIDGAYIRVPRMRLANLLQNDVSITTQSSANSDSA
YKANFTLMNSDMTQPVPSNVNDKYSFLNNTSWLDEFSDEISETKTLNKTQSQDSVKTGGL
ESFSQTEMEAIIQFIKESKSVLQLSKEEINQVLALVEVVGEMDGVRQPSRCAGLDTSGQR
FWLAYRYNSLLASQSVGQKGDIRGSQVDSEALAWALQSDTKETLLDICASEQSLWPELRA
LGVGFWFTDAVPLKKKMEKVARLQFMASRDAKDCALLYIALERRTILAGLFKISKDERDR
PLVDFMARDFREEKHKAAALKNAYVLMGKHRHELAAAFFLLGGDMDSAVSVCIKNLEDPQ
LGLVVCRLVEGADGPVGRKMISKYVLPGALRAEDYWLASLCQWLLGNGIETMHEVVSGHQ
PSISFQSVQGNATETKTISSSIPLDPDVADYCSVLALKPRILREPNRGKVVAISKQATLR
ASLALRKIGLPLQALELMTANSGVKNIAESGRRENSSQSMGFNLDLVKLAASQDGRIHTN
RLLPELIADIQELSKLNLALELMSELVQEYSDWTGAQQGFMRRLPDVPEGGESSSNAEAG
SASEEDAEKRIEEGLEVLKRTFSLDVSAFVAGVVTWALNHHRLYVYYRYLLAQHAGFKNP
EQKFSLSSGVGLTLKCDILGSIWTEAPWGLARMILGCGGSVSSLPFIASKWLPWKSTMPK
EQIEELVRYGGELQKLASLLSGYTGSTDSQVNENPFHLGNEDLKNKTQRAMILLAFVYYV
SAAWLGKNGRALVALVRPTISDATKAPEVPKTNNSVKWFRDLSSQSRVEQSSLTTSAVSR
NLGASVSIPEEEAWRVTGVALWVHMVAYIKKQLAGTGKETGYSGFGRVSVPLAPPKNASS
LSSSNVASASPAPSTSSSSRLVATFMGLGIQSASAGSSTAWSEIKNKMREDTQAATNVST
PSNRDIVRVVDSPRSNRNYGDLYLSLLSSLGCVATGLQQQLAAHLQTLLETKGNSDPLVL
WLWGKSPDSKMEGSNSPNAGTSANKPASTSVWRQQSPVYPEIQLGGDDESSKELWSLLVM
KESIRSTLAMEGVIAPRPIIPSANVGGWREARKRSTLSVTGVDKQTSTDSSTKNSRITDK
ALTIGGTRDREGSEGCYAPEFQKPEVMFSLSGELIEAFCINSCNPNQVVLATNRKQGLMY
LDLHTRGPFTETSEPVLEECLSSPPRRSSWAGAVATPGSNLRSQRSSTVSLGGPAAGGPV
KSGKETLRVGGAAFGMPGYGGMGAWGGWEDWEDVDSFVDPIATVDNVRTKALAAHPSQPI
FLVGSNNTHVYLWEYGRPSATATYGVLPAGNMPPPYVIPSVQTVRFDSGGHRFVTAAMDG
TVSTWQLEVGGRSNVRPTESCLFFGAHASDATFIVGSNSLVAATGMTNTGNNLIAWETLA
PPSSNRQSISCHEGGARCIASLDVGIGGSSNSPWIVSGGKGGDITVHDFRYILSKKGRRP
QSPLSSSSKNSVDESGRNGMLWHVSKAHSGSVTRATSVPGTPYFFTGSKDGDIKLWDVST
RSMVGHWQRVHERHTFLQVNSRSLGSIIQQAAVTDVQPTVDGFLSCGGDGTVKLFKHQY
NT seq
7920 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttccttgccgggatcaccgtatgagctctcaattcagcaagaccttcctcct
gcaccaaatgttggaacacaatgcgcagattggttgccccgatttgcaggctcaagctgg
ttggcgtatgctgctagcagtgccatcgtgattgctactgcagcgtccccattgaattct
ggagaatcctcttccggccgttttttccagcaggttcttgaaacacgtaccaataatgac
ggagacgactgcataggaaggagcttggtgacaagtgtaggatgggcacccgtgggttca
tctgttggtcagctggctgctgcatgcggcaatactttactattgtattcacccacgacg
ttggcgagtgccacagctggctcacgttattcagagattccattggcgtgggaaaccaag
caggtcatgcaacacttatttcagattctcactttttcatggaccgaatcaggagatggg
ctactagctgccggatcaaatattgccatgtggaaacggggtgaagcaggattttcggtt
ctctggcaagttcagtgtactgtaccccaagtgtatgcagcttcttcatggtcctctgct
ggtctggcagccacggtggattgtactctggggacgcatcctaaatctgttgcgacgaaa
gagtcaactatcgatggagaaacttcggactcattgaactcattaagcggaaaagcaaca
gtgtggtggtggtggcaggaagctcatgaaattcaagggattgagttacaacacccttct
gaggtttctatgatccagtggaggccgtcgaatggttgcggagaggatccattcacttat
cggcctgtgcttcttacgtcttcaagagatggctctttacgcctatggctggacatggaa
ggtcctagctatttaagcttctgttttggagacagtcaggaattgagaaagaagcccact
ttctccatggctgctgtggttgacgtgaacaagtgcttgaatggcattctaggatacgac
atctttgtgacctgggcttctgaaaacaggacccggggtaattctgaagagaagaggctc
ttaacgagaaataacagtgtaaaaaggccagatttaataccttgtgagtggctggttgga
gttgggcctcgtggcaaagttgcactatggtctattcacagtctggatgatatattacct
acacgttttcctcgagttactctttggcaggagggggatggtgttttagctcagccatct
acattctatccatttcgaatggaggatgctgataatgcgagggatcgactgatgatgatg
aaagctgttgttcaaagacctgaaggggcgatggccgtccctccttcttctttggatctt
tttgaagctcttccaagtggacattttcgatggtcccgcttatggccacctgtttctgcc
gtaggaactggaggaggtcacgtcggctcaggaacccaaacatcaagaaataaaagttca
tggggggtatcatctgaagttgtttatctagatggtcatcgtggtgctatcgttcaggtt
gctcttcatcctagccctacagttgcgcttgcagcttctgttgatgagcaaggagttatc
ttgttgtgggacttatctgcatgggctagtcctcaggtcgaagtcatgagctcacaaact
ttaggttggaagttggctggtcaaatctcaggtctccttaatacgtcgttgttttatcag
ctaattgcatgggctccttcatctttacctgaagggagagctatattgcttgccggagac
ctcatgaaaatcgactgctttttagttggtaggagtgattcacaacggaagggtgtaacg
tctgttctctttgatcacctgtactccctgcactgctccacttttgacaagggggatcac
cttaacgccttcactgcggttcctatgccattgaatgctcttcagcaggttgctgaagag
agaagctttctcatcgtagggaccaaccgaggaggtagtatcttagcttcatgggtggtg
gagttacaagtgactgcgctctctgatggtggccaagatgataaggttgctgcagtagat
acccaagaggttcaggagacggagaggcctcactctaaactccaatatttggaaaagtca
ggttacacgctatatggaggctctcttacctctcaggagcgaatatacataagaggcagt
tttgtagggtccgcaaattttgatgctgatcagtgtgtgacaagcattgctgtagttcca
ggatttatcaaaggttctttgtcaacccatttggaggtgtaccagaaggcccacccatat
gatgttttgacaggttgtgcagatggtagtattcgattgtataaagtcttctgctctcag
gcacattcagttgtgcctcaaactaggtctttcgtctgggaatgcgtaggtgttgtgcgt
gctcactgtagttctgtaatcttagctgctgcaactgctagtggtgataagtttgcttcg
gttggggacgcggatcacaagttagtgaagatttgggaagtggacggctgcaacgatgat
ggggactttgaacttgaaagtcaaattacttttccgcaagccgtcgttgcattaagctgg
atgaatgctggtatgggctgcgtgctgctggctgttgcaacaaaattcgatcttttcatt
tatgcccaagacaggacatattctcataagggggttccgaaagatagagtctggatctgc
cttgcctcctttttgtttaatactgcgattgatcatcttttctggagctttcagggttca
cctatactggcatcacaaggccatatatgggttttcagcccctgggtttgttcaaagacg
agattaagtggttatcatggttacgtacattcttcaaacggaattcctcagccagccgcg
cgtcactcatgtagtcttcttcaagccgcagaagcacttgtttctcctttaccggattat
caccccagagcgcttttttggagcttatttaaaggaaatatgtcacgggctcgtgcatgt
gttcgtcatcttgctcaccacttggcaacttctgcaaaatctactgcaaaacgtgatggg
acacttcattctgattggatcgatggagcttacatccgtgttcctcgcatgagactggct
aatcttcttcaaaatgatgtttctatcacgactcaatcctcagcgaattcggattctgct
tacaaagcaaatttcactcttatgaactctgatatgactcaaccagtgccatcaaatgtt
aacgataaatattcatttttgaacaacacatcatggttggatgagttttccgatgagatt
agtgagactaagacattgaataagactcaatcacaagactccgttaaaactgggggttta
gagtctttttctcaaactgagatggaagccattatacaatttataaaagaatccaaaagt
gtgttacagctctctaaggaagaaatcaatcaggtgcttgcactggtggaagtggtgggg
gaaatggatggtgttaggcaaccttcacgatgtgcaggtcttgacacctctggacaaagg
ttttggttggcgtatcgatacaacagtttacttgcgtcgcaatcagttggtcagaaggga
gatatacgaggtagtcaagtggattcagaagcattggcgtgggctttgcagtcggatacc
aaggagactctgctggatatttgcgcatccgaacaatctttgtggccagaattacgtgca
ctgggtgttggcttttggtttactgatgccgttccccttaagaaaaagatggagaaagtg
gctcggttacaatttatggcaagcagagatgccaaagactgtgccttgctgtatatagct
ttggagcgacgcacaattttggcggggctttttaaaataagtaaagatgagcgtgataga
cctcttgtcgacttcatggctagagactttcgagaggagaagcacaaggcagctgctctt
aagaatgcctatgttttaatgggaaagcataggcatgagctggcagcagcattttttcta
ctgggtggagacatggattctgcggtgtctgtctgtataaagaacctggaagatccgcag
ctagggttggttgtgtgtcgccttgtagaaggtgccgacggtcctgttggacgcaaaatg
atcagcaaatatgttctcccaggggctttaagggctgaagattattggctcgcaagtctt
tgtcagtggttattgggcaatggaattgagactatgcatgaggttgtttctggacaccag
ccttctatatcttttcagagcgtgcaggggaacgcaactgaaaccaaaacaatcagtagt
tccattcctttggatcctgatgtggcagattactgctctgttctagcattaaagcctcgt
attcttcgagaacctaacagaggaaaagtggtggccatctcaaagcaagccacactgcga
gcttcattagcactgaggaaaattggacttcctctgcaagctctagagcttatgacagct
aactctggtgttaagaatattgctgaaagcgggcgacgagagaattcctcacaaagcatg
ggcttcaatctggaccttgtgaaacttgcggcctctcaagatggacgtattcatacgaat
cgccttctccccgaactgattgcagatattcaagagctttcaaaactgaaccttgctctt
gagttgatgtcagaactggtgcaagaatactcggattggacaggtgcacagcaaggcttt
atgcgcaggcttccagacgtacctgagggtggtgaatcatctagtaatgctgaggcgggg
tctgctagcgaagaggacgctgagaaaagaattgaagaagggcttgaggtgttgaaaagg
actttttctctagatgtctctgcctttgttgctggggtcgtaacgtgggccttaaatcat
catcggctgtatgtctactatcgttatctacttgcacagcacgcaggattcaaaaatccg
gaacagaagttcagtttaagctctggagtaggtctgactttaaaatgcgatattttggga
tcaatatggacagaagccccgtggggacttgctcggatgatcctgggttgtggtggctca
gtttcctcattgcctttcatcgcatctaaatggcttccttggaaatctacgatgcctaag
gaacagattgaggaactggtacgttatggaggagagctccagaaactcgcaagtttattg
agtggatatactggttctactgacagtcaagtgaacgaaaatccatttcatttgggaaat
gaagacttaaagaataagactcagcgggccatgatccttctagcatttgtctactacgta
agcgcagcatggctaggaaagaatgggagagctcttgtcgccttagtcaggccgacaatt
agtgacgcgacaaaagcccctgaagtacctaaaacaaacaatagcgtgaaatggttccga
gatctcagttctcaatctcgtgtggaacaaagcagtttgacaacttctgcagtctctagg
aacttgggcgcatctgtctcaatacctgaggaagaagcatggcgagttactggtgttgcc
ctttgggttcacatggttgcttacatcaaaaaacagttggcaggaacgggaaaggagact
ggctacagtggatttggccgtgtctcggtccccctagccccaccgaaaaatgcatcaagt
ttgtcgtcatctaatgttgccagcgcttcgccagccccctccacctcttcatctagccgg
ctggtagctacctttatgggtcttggaatacaatctgcatctgccgggtcctccacagca
tggtctgaaataaaaaataaaatgcgggaagatactcaagcagcaacgaatgtctcaact
ccaagtaaccgagatattgtcagagtggtggatagtccaagatcaaacaggaattatgga
gatctttatttatctctgctcagttccctaggatgtgtagctactggacttcaacagcaa
ttagctgcacatctgcaaactttgttggaaacaaaaggaaacagcgatcccttggtgctt
tggctttggggaaagtctcctgattcaaagatggagggttcaaattctccaaatgcaggg
acatctgcaaacaaaccagctagtactagcgtttggaggcagcaatcgccagtttatcca
gaaattcagctgggtggagacgatgaatctagtaaggaactctggtcgcttttggttatg
aaagaaagtatacgatccaccctggcaatggagggtgtgattgcacctagacctatcata
ccaagtgctaatgtaggtggctggcgagaagcaaggaagaggtccactctttcggttact
ggagtggataagcaaacttcaacagactcttctaccaagaacagtaggattacggataag
gctctcactatcggaggcactcgagatcgcgaaggatcggaggggtgttatgcaccagaa
tttcagaagccggaagttatgttttctttgagtggcgagcttattgaggcattttgtata
aattcttgtaatccgaatcaagttgttctcgccaccaatcgcaagcagggactgatgtat
ctagatttgcacacacgtggaccattcaccgagacctccgaacccgtgttggaggaatgt
ctctcgtctccaccgaggagaagtagctgggcaggagcggtggcaactcctgggtctaat
ttgagaagtcagagaagttcaactgtaagtttaggtggtcccgcagcaggtggacctgtg
aagtcaggaaaggaaactctcagagttgggggtgctgcatttgggatgcctggttacgga
ggcatgggtgcttggggtggttgggaggactgggaagatgttgatagtttcgtggaccca
attgccactgttgataatgtgagaactaaggcattagcagctcatccatcccaacctatt
ttcttagttgggtcgaacaacacacatgtctacctttgggagtatggaagaccaagtgca
acagcaacttatggtgtgctaccagcaggcaacatgcctccaccgtacgtcattccttct
gttcaaacagttcgatttgactcaggtggacaccgcttcgtgacagctgctatggatggt
actgtgtccacctggcagcttgaagttggaggacgcagcaatgttcgccccacagaatct
tgtctcttcttcggcgcccatgcctcggatgccacctttattgtgggcagcaactcgctt
gtagctgccacaggaatgaccaacactgggaacaatttaatagcatgggaaaccctagca
cctcccagttcaaatcgtcaatctatttcgtgtcatgaaggaggtgcccgctgtattgct
tccttggatgttgggattggagggagttcaaattcaccttggatcgtaagtggaggaaag
ggaggcgatattactgttcacgattttcggtacatcctgtcaaagaaaggcagacgacct
cagtcgcctctatcatcaagttccaagaacagtgtagatgagtctgggagaaacgggatg
ttgtggcatgtatctaaggcacattcaggaagcgtcacaagagcaacatcagtcccagga
acaccatacttttttaccggaagcaaggatggagacataaagctctgggatgtgagcaca
aggtcaatggtgggtcactggcaaagagttcatgagcgtcacacatttcttcaagttaat
tcaaggagcttgggttctataattcagcaagctgcggttactgatgtgcaaccaaccgtg
gacggattcttaagctgtggcggtgacggcactgtcaaattgttcaaacaccaatactag
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integrated database retrieval system
