Physcomitrium patens (spreading earthmoss): 112279549
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Entry
112279549 CDS
T01041
Name
(RefSeq) protein FIZZY-RELATED 1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112279549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112279549
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
112279549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_Gbeta
Beta-prop_EML
Beta-prop_IFT140_1st
WDR55
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Aldo_ket_red
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
112279549
NCBI-ProteinID:
XP_024369884
UniProt:
A0A2K1KX37
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Position
3:complement(22965059..22968468)
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AA seq
521 aa
AA seq
DB search
MDHPMDGSVDIENGYQFRIAQSLNLPVGMSRDALHLDSIARRSWQRSVAPTKNMIGAAST
LSPTKTSYSDRFIPSRSSSNLSSFSLLDRALSGANIVQSSDSKEDGSGAYSMLLRSELFG
QVGSSPVTPEKSFGIGSRDSMRSPISPKSRNMFRFKSECKPSTGLNSQPESPYSLSPVGI
DSTMTGATVSPRKAPRKIARSPCKVLDAPALQDDFYLNLVDWSSSNVLAVGLGTCVYLWS
ACSSKVTKLCDLGLTDSVCSVGWTQRGTYLAVGTNLGDVQIWDATRYRKVRTLGGHRTRV
GALAWSSHMLSSGSRDRSIFQRDVRSPEDFVSKLVGHKSEVCGLKWSCDDRELASGGNDN
QLLVWNQHAAQPIVKFSEHTAAVKAIAWSPHQNGLLASGGGSADRCIRFWNTATSSHLNC
YDTGSQVCNLAWSKNVNEIVSTHGYSHNQIIVWKYPTMSKLATLTGHSMRVLYLATSPDG
QTIVTGAGDETLRFWNVFPSPKSQSAVRDTGVWSLGRTHIR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcctatggacgggtccgtagatattgagaatgggtatcagtttaggattgca
cagtctcttaacttaccggttggcatgtcgcgagatgcattgcacctcgactcaattgcc
aggcgatcttggcaaaggtcagttgctccgacgaagaatatgatcggtgcagccagtacc
ctgtcacccacgaagacctcatacagcgacaggtttattcctagccgctcgagttcgaac
ttatcaagtttctctcttttggatcgggcactatcaggagccaacatcgtgcaatctagc
gatagcaaagaagatggctcgggggcctactcaatgttgttgaggtcagagctcttcgga
caagttggaagttcaccagtaacaccagaaaagtctttcggaattggttcccgagattca
atgcggtcgcccatcagtccgaaaagtcggaacatgttccgttttaagagcgagtgcaaa
cctagcaccgggttgaattctcagccagagagcccttattccctttcgcccgtgggaatt
gatagtacaatgaccggggcaaccgtatcgcctcggaaagcgccgaggaaaattgcgcgg
tccccctgcaaggtgttggatgcgccggctttgcaggacgatttttatctcaacttagtg
gattggtcatctagtaatgtgcttgcggttggattgggcacttgtgtgtacttgtggagt
gcatgcagcagcaaggtgacaaagctctgcgatttagggctcacggatagcgtctgctcc
gtagggtggacgcagagaggcacgtatctcgccgtcggaaccaacctgggagatgtgcag
atttgggatgccacacggtacagaaaagtgcggactttgggtgggcatcggacgcgagtt
ggggcgctggcatggagttcacatatgttgtcatctggcagccgagaccgaagtatattt
cagagggatgttagatcgccagaagattttgtaagtaaacttgtagggcataagtctgaa
gtgtgtggactgaagtggtcgtgtgatgatcgagagctcgcatctggaggaaatgataac
cagttacttgtctggaatcagcatgcggcgcaacccatagtaaaattcagcgagcacact
gctgctgtgaaggccattgcttggtcacctcatcaaaatggattgttagcatctgggggc
ggctctgctgatcgatgcatacgattttggaatactgctacgagctctcatttaaattgt
tacgacaccgggagccaagtgtgcaatttagcgtggtcgaagaatgtgaatgagattgtg
agtacgcacggctattctcacaaccagatcattgtttggaagtatccaacaatgtctaag
cttgctacattgacagggcattcaatgcgggttttgtacctagccacatctccagatggt
caaacgattgtgactggagctggcgatgagacgctacggttttggaatgttttcccatct
ccgaaatcgcaaagtgctgttcgtgatacaggtgtttggagtcttggacggacacacatt
cgataa
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