Physcomitrium patens (spreading earthmoss): 112279568
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Entry
112279568 CDS
T01041
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00040
Pentose and glucuronate interconversions
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112279568
Enzymes [BR:
ppp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112279568
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112279568
NCBI-ProteinID:
XP_024369921
UniProt:
A0A2K1KV92
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Position
3:complement(13920294..13923633)
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AA seq
460 aa
AA seq
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MEWFLLAAVAATAWWAHCTQAHLLMDEDLTMTQLPASADLFLSKVLETIDPHYVERKKNS
TRRILASANGNPVDDCWRSDSNWHNDRQALADCAIGFGKNAAGGKEGRVYVVTDDSDDNV
VNPKEGTLRYGVLQEEPLWIVFDRNMKIKLKNELILTSYKTIDGRGANVHLSDGAGLKIQ
FVQNIIVHGIHFHNIVPTGPAVIRSSPTHVGHRDKTDGTAIAIFTSHDVWVDHCFFSKAD
DGLVDAIRGSTRITVSNCYFSNHDKAMLFGAHKQDTEDRDMTVTVAFNHFGPNLMQRLPR
MRFGYCHVVNNDYPSGWGMYAIGGSEDPTFLSEGNRFVASKNKEVTKRVDDGGNDYGGEE
NWNWASSGDLLFNGATFESSGANGGASVYNKAMSLSARPASLVEIITSDSGPLMCTAGDG
YCAGNYPLQSTSMTFKRQSPSPLFVLLYMSVMLLFPLILC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagtggttcttgcttgctgcagtagctgcaacggcgtggtgggcgcattgcacccag
gcgcacctgcttatggatgaggatctcacaatgactcagctgcctgcatctgccgacctc
ttcttgtccaaggtgctggagactatcgaccctcattacgtggaaagaaagaagaactcc
actcggcgtattctcgcttctgccaatgggaatccggtggacgattgctggcgttccgat
tccaactggcacaacgaccgccaagcgctagcggattgcgctattggattcggtaaaaat
gctgccggtgggaaagaaggccgagtatacgtcgttacagacgacagcgacgacaatgtc
gtgaaccccaaggagggcactctccgctacggtgtgctgcaagaagagcccctgtggatc
gtttttgacaggaacatgaagatcaagctcaagaacgagctcatcttgacctcgtacaaa
actatcgatggccgcggggcgaacgtccacctctcggatggagctgggctgaaaatccag
tttgtgcaaaatatcatagtgcacgggattcatttccacaacatcgtccccacaggtcct
gctgtgattcggagcagcccgactcatgtggggcaccgagataaaacagatggcaccgcc
attgccatcttcactagtcatgatgtttgggtggatcattgtttcttctccaaggctgac
gatgggctcgtggacgctatccgtgggagtaccaggatcactgtgtcgaattgctatttc
agcaatcacgacaaggctatgttgtttggagcacacaagcaagacactgaagatagagac
atgactgttaccgtcgcattcaaccacttcggaccaaaccttatgcagcgcctccccagg
atgcgttttgggtattgtcatgtagtcaataacgactacccatcaggttggggaatgtac
gccattggagggagtgaagaccctacatttctcagtgaggggaatcgattcgtggcatca
aaaaataaggaggtgacaaagcgcgtggatgatgggggcaatgactacggtggcgaggaa
aactggaactgggcctcgagtggtgacttgctcttcaacggtgccacattcgaaagctct
ggagccaacggcggagcatcagtgtacaacaaagccatgagtttgtcagctcgtccggca
tccttggtggagatcatcactagcgattcgggacctctcatgtgcacagcaggggatggg
tactgtgcggggaactaccctctgcagtcaaccagcatgaccttcaagaggcagtcacca
tcgccgctcttcgttctcctctatatgtctgtaatgctgctatttcctctcattctctgt
tag
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