Physcomitrium patens (spreading earthmoss): 112279696
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Entry
112279696 CDS
T01041
Name
(RefSeq) DNA topoisomerase 1 beta
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112279696
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112279696
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Topoisomerases
112279696
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Phage_GPO
ABC_tran_CTD
SlyX
CC_Bre1
ABC_export
Motif
Other DBs
NCBI-GeneID:
112279696
NCBI-ProteinID:
XP_024370141
UniProt:
A0A2K1KU92
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Position
3:complement(8584709..8589358)
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AA seq
849 aa
AA seq
DB search
MGEDDKMQAMKRQRLEDGQNGASTAGSSKSGSGGRTKDGSSREGDHRTFERRKSGLAAKP
PARKFVMDDDDSDDDMPLASRLPVTAKGKVVKGSPIAKSGKDISASIKDERGSDKAKAPE
PKQPIHYESDDDDKPLAHHVQRKPTASIVDDDSDDDKPLATRLPSGVKTYQRKDSLPKTV
PGVKQESSPQSKPSTPSSVKTPKISSTMPSSGKSDSKMEVDGDDDEDDDIPLAQRMSSST
SIIKKVVQQKAKASSSTGSTAIAARKLLEKKKAKRLQLQMMVTKKKVITKTTTKSKKVEP
VSGDGVKWTTLEHNGVIFPPPYEPHGVKMLYDGKPVDLTPAQEEIATMFAVMLETDYAKK
ERFIKNFWDDWKPYLGKNHVIKKFELCDFTPIFDWHAREKERKKSMSTEEKKRLKEEKLA
VEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGDHPKMGKLKTRILPHDIVINIGKDAAVP
ECPIPGQRWKEIRHDNTVTWLAYWKDPINDKEFKYVFLAASSSLKGQSDMQKYEKARMLK
DYIDDIRRTYTHDFSSSDPTKQQIAVATYLIDRLALRAGNEKDEDEADTVGCCSLKVEHV
TLVAPKSLQFDFLGKDSIRYFNTVEVDERVYKAIGQFKKGKKEGDDLFERLDTTKLNLHL
KGIMPSLTAKVFRTYNASITLDNLLQDTTGETTIEIIADYQRANKQVAILCNHQRSVSKG
HSAQMERLEGKMQELEEQLEELETDLDRAKKGKPPLKDSEGKVKRNQTPEALEKKIAATK
QKIDKMRLDMRVKDDLKTVALGTSKINYMDPRITVAWCKRHEVPIEKIFNKSLLSKFAWA
MEVEPDFRF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagatgacaagatgcaagcgatgaaacggcagaggctggaggatgggcagaat
ggcgcaagcacagccggaagctccaagtctggaagtggaggacggaccaaagatggctct
tctagagaaggtgatcatcggacatttgagcgtcgtaagagtggattagcggcaaaacct
ccggctaggaagtttgttatggacgatgatgattcggacgatgatatgccactggctagt
cgattgcccgttactgcgaaaggcaaagttgtcaaggggtctcctatcgcgaaaagtggg
aaggatatttctgcttccatcaaggatgaaagagggtcagacaaggctaaggctccggaa
ccgaagcagccgatacattatgaatccgacgatgacgacaaacctcttgctcatcacgtc
caaagaaaaccaactgcgagcattgtagatgatgattcggatgacgacaagccgctggca
acgcgcttgccttctggtgtgaagacttatcaacgaaaggattcgctgccgaagacggtt
ccaggagtcaagcaggaatcatcgccgcagagtaagccttctactccctcatctgtgaaa
acgcctaaaatctcttccaccatgccatcctctggaaagtccgatagcaagatggaagtt
gatggagacgatgatgaggacgacgacatccctcttgctcagcgaatgtcctcctcaacc
agtatcatcaagaaggtcgttcagcaaaaggctaaagcgtcttctagtacggggtctact
gcaatagcggcgagaaagcttttagagaagaaaaaagccaagagattgcagcttcagatg
atggtgactaagaagaaggtgatcacgaaaaccaccaccaagagcaaaaaggtggagcct
gtaagtggcgatggggtcaagtggacaactttggaacacaatggtgtgatctttcctcct
ccgtatgagcctcatggcgtgaagatgctttacgacggaaagccggtggatctcacaccc
gcgcaagaggaaattgcaaccatgtttgccgtgatgttagagactgattatgcgaaaaag
gaaaggtttatcaaaaacttttgggatgattggaagccgtatttggggaaaaatcatgtg
attaagaagttcgagctttgtgatttcactcccatctttgactggcatgcgagggagaag
gagcgaaagaagagcatgtcgacagaggagaagaaaaggttgaaagaagagaagcttgct
gtggaggaaaagtacatgtgggcggttgttgatggcgtaaaggagaaagtcggcaacttc
agggtggagcctcctgggctgttccgtggccgtggagatcatcccaagatggggaagctg
aagacgagaatcttgccgcatgacattgtgatcaatattgggaaagacgcagctgtacct
gagtgtccaatccctgggcagaggtggaaggaaattcggcatgataatactgtgacgtgg
cttgcctactggaaggacccaatcaacgacaaagagtttaagtatgtgtttttagctgct
agcagcagcttgaagggtcaaagtgacatgcaaaagtatgagaaggcacgtatgctcaaa
gactacattgatgacattcgaaggacgtacacacatgatttctcgtcttcagaccctact
aagcagcagattgctgtagcgacgtatcttattgatcgacttgcccttcgtgctggtaat
gagaaggacgaagatgaggccgacactgtaggttgctgctctctcaaagtagaacacgtc
actctggttgcaccaaagtcactccaatttgactttctgggaaaagattcaattcggtat
ttcaacacagtggaggttgatgagcgggtgtacaaggctattggccagttcaagaaggga
aagaaagagggagatgatctgtttgagagactggacaccacgaagctgaatttgcacttg
aaggggataatgcctagtctcactgccaaggttttccgtacatacaatgcttccattact
cttgacaacctgctgcaggataccaccggggagaccacgattgaaatcattgcagattat
cagcgtgctaataagcaggttgccattctgtgtaatcatcaacggtctgtgtcgaaaggc
cacagtgctcaaatggagagattggaaggcaagatgcaggagttggaggagcagctggaa
gagctggagacggatctggacagggcaaagaaaggtaagcctcctttgaaagattctgag
gggaaggttaagagaaatcagaccccggaggctcttgaaaagaagattgcagctacaaaa
caaaagatagacaagatgagactagatatgagggtgaaggatgatctcaagactgtggct
ctgggcacctctaagatcaattatatggatcctcgtattactgttgcttggtgcaagcgt
catgaggtacccattgagaaaatttttaacaagtctttgctttccaagtttgcatgggct
atggaggttgagccagactttcgattttaa
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