Physcomitrium patens (spreading earthmoss): 112279805
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Entry
112279805 CDS
T01041
Name
(RefSeq) histone deacetylase 19 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03082
ATP-dependent chromatin remodeling
ppp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112279805
03083 Polycomb repressive complex
112279805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppp03036
]
112279805
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112279805
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
112279805
HDAC complexes
Sin3A-HDAC complex
112279805
BRAF-HDAC complex
112279805
REST complex
112279805
SHIP complex
112279805
MiDAC complex
112279805
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112279805
Heterochromatin formation proteins
Other heterochromatin formation proteins
112279805
Chromatin remodeling factors
NuRD complex
112279805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
112279805
NCBI-ProteinID:
XP_024370293
UniProt:
A0A2K1KW85
LinkDB
All DBs
Position
3:18203436..18208718
Genome browser
AA seq
723 aa
AA seq
DB search
MEGGNSLVAGPEGRKRRVSYFYDPDVGNYYYGQGHPMKPHRIRMAHSLLVHYNLHTRMEV
LRPYPARDRDLCRFHADDYVSFLKEVTPETQHDQMRQLKRFNVGEDCPVFDGLYNFCQTY
AGGSVGGAVKLNHGHSDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYI
DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGID
DESYQSLFKPIMSKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSVKGHAECVRFMRSFNV
PLLLVGGGGYTIRNVARCWCYETAVAVGEELDDKLPHHEYYEYFGPDYSLHVAPSNMANQ
NSKKDLDNLRMKLLDNLSKLQHVPSVPFSERPPDTELPENEDEDLELRDKGRAWDGELSE
SDSEEHDLRRRSQGIVASEAAFARRPPPLGSVRGKSEEDAGEAMSSDDEIEMEDETGKGP
EDSKDAAEEHAEMDVDPRVEAGSEAEAPSNMEVGEAPRAEQADISTGPAPAVVVTPPTTT
ANVGRESSLSVSSAPPLHGPPLSANATAKPAASFGRVVERSTVAPAAGNPNQSNSSFGGA
PGFTQRAYVPPQPGAASNIPWRQSQPGNHSKTNNPSSNSYTPSQAGLSFGNRTGPPPPSV
GVSVLGSVSGILPRPNVSLAVPPGRPVPPGPGSVPVRPAGPANRFPSTTIPAAGLGEPAG
TDL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggtaattcgctcgttgctgggccggaggggaggaagcggcgggtgtcgtac
ttttacgatcctgatgtcgggaactactactatggacagggacatcccatgaagcctcac
cgcattcggatggcgcactcgctgttggtgcactataatttgcacacgaggatggaggtg
ctgcggccttacccggcgcgcgatcgcgacctctgtcgttttcacgcggatgattatgtt
tctttcttgaaagaggttacgccggagacgcagcacgaccagatgaggcaactcaagcgt
ttcaacgtgggcgaagattgccctgtgtttgatgggctgtacaatttctgccaaacctat
gctgggggctctgtcgggggcgccgtgaagctgaaccatggccacagcgacattgccatc
aactgggcgggaggcttgcatcatgccaagaagtgcgaggcttccgggttttgctatgtt
aacgatatcgtgctggctattttggagcttcttaaataccatcagcgagtgctctatatt
gatatcgacatacaccacggagatggcgtggaggaggcgttttacacaactgatagagtg
atgacagtgtcttttcacaagtttggggactactttcctggaactggagatgttcgagac
attggttatgggaagggaaagtattattcgctgaatgttccattggacgatggaattgat
gatgagagctatcagtcgctttttaagcccatcatgtcgaaggtgatggaagtattccaa
cctggtgcagtggttctacagtgtggggccgactctttgtcgggtgatcgacttggctgt
ttcaacttgtctgtgaaaggccatgcagagtgcgttcgatttatgcgatctttcaacgtg
ccgttgctgcttgtgggtggtggcgggtacacgattcgcaatgttgctcgttgttggtgc
tacgagacagctgtggcagtaggagaagaattggacgataaattgcctcaccatgaatat
tacgagtactttgggcctgattattctctacatgttgcacctagtaacatggctaatcaa
aattcaaagaaagatcttgataatttgaggatgaaactattggataacctatccaaattg
cagcatgttccgagtgtgcctttttcagaaaggccaccagatactgaactccctgaaaat
gaggatgaagatttggagcttcgtgataaaggccgcgcatgggatggcgaactgtctgaa
tctgactctgaagagcatgatctaagacgccgcagccagggtatagttgctagtgaggca
gcattcgcaagaagacccccgccgttgggttcagttagggggaaatctgaggaggatgct
ggtgaagcaatgtcttcggatgacgagattgaaatggaagatgagacaggaaaaggtccc
gaggattcaaaagatgctgctgaggagcacgctgaaatggatgtggatccaagggtggag
gctggatccgaggctgaggcaccatcaaatatggaagttggtgaggcacctcgggcagag
caagcagatatttctacaggaccagctcctgctgtagtggtcacaccaccgacaaccaca
gccaatgtcggaagagagagcagtttatctgtatcttcagctccccccttgcatggccct
cctttaagcgcaaatgctactgcaaaaccagctgcttcttttggtagagtcgtggagcga
tcaacggtcgcccctgcagcaggaaatcccaatcaaagtaattcttcttttggaggcgca
cctggttttacgcaaagagcatatgtgcctccccaaccaggcgcagcgtcaaacatacct
tggcgacagtctcaacctggcaaccattcaaagaccaacaatccatctagtaattcatat
accccatcccaagctggtctttcatttggtaacaggacaggccctccgcctccgagtgta
ggagtatctgttctaggctctgtttctggaattttgcctcgtcctaatgtaagcctcgcg
gtaccgcccggtcggccagttcctccaggccccggttctgttcctgtaagaccggcagga
ccagcgaaccggtttccatccaccaccattccagcagctggattgggagagcctgcagga
actgacctctga
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