Physcomitrium patens (spreading earthmoss): 112279872
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Entry
112279872 CDS
T01041
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppp03036
]
112279872
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppp04812
]
112279872
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112279872
Cytoskeleton proteins [BR:
ppp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
112279872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_EZ
HEAT_2
Adaptin_N
DUF4042
TAN
DNA_alkylation
Motif
Other DBs
NCBI-GeneID:
112279872
NCBI-ProteinID:
XP_073388615
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Position
3:21613737..21621364
Genome browser
AA seq
1112 aa
AA seq
DB search
MDEALEQLQRGDTKDRLAGVERLQRLLEQSQKSLSEKEVMALVDASTVLLKDNNFKVCQG
TLHLLTLAAVMSGEYLRVHYNQLVPAVVERLGDNKQTVRDASRRLLLALMEVSTPSIIAD
RAGSYAWTHKNWRVREEFAHTIASAFNLFSSTGFHFQRMHLPANLQLLEDSNSNVREAAL
VCLEEMYRHGGQNVKDELQRHHLRPALMKEISFRFDRIEPTKQLDNEHATTSGVGRSNHR
NSCHSPVSPILHSNVETKVCHFGGNQRPHRRCSPKYKSMLSTDVHLGGGSGGNDKPVGPI
KVFSERELTKELDKIVSLLKAEQEWSVRMAAMQKLEGIIVGGAVEFGCFLTLFKNFTGPL
SGQLLDRRSSIVKQACQLLNLLSKQFQIDFESFAEVFIPVLFRSVVVTVLVIGESADHCI
KTMLENCRVARVLPRIIECAKHDRNAILRTKCCNYALLVLEKWGDSPELHRISDLYQELI
RCCTLDAVAEVRSNARACYQVYSKLWPDRARRVFSLLDPAVQKLYHDEEVNRRYLFSPAK
DLGGDEFNQLRRSTRMSVHSVQTLKGETSNDRSKRLVPGSEPSTASNLLLRKSLDISSDI
IPEKMLEASQLNAIDTTSKGVDSPEGVVYAPGRIAGGSYLEIHAPTPTGTMRVIADSPSA
RDPPHPASAPASCHCNALQFKVSGYSSFTGSSTTIPASAGLEDRKEEEHENNSLEIKSKI
LNATVGGASVGSPGANRVLSSTETPCYNVFEGSFMDREIKQNPILDVHIEKLRIADSSSS
IGSLSHRISWRHTASGKSSECTSGGNIHQPGGLNPQAEMLNYMDGVMSLNDALTEGLGPN
ADWSARVAAFTYIQKLLQQGSKGSQEVAQNFDRMMKLFTTHLDDPHWRVTQAALSALIEL
VRTSRRMFEPYLERTLPSVFARLVDSKDSIRQLGLSALETIGDTYTIDTLLLPLLRSIDE
QRIPKARMTVIEFAIAAFARLANDGSGTGSTGLLKLWLAKLAPLANDKNAKLREAAIAGI
ISVYSQFDPTIVLNFILGLSIEEQSMLRRSLKQFTPRIDLDLMAFLHNKVQRPRTKPVPD
QTDATRGTVEESTGRALSALTGDDAEIRGSSI
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcacttgagcagcttcaaaggggagacacgaaagacagactagcaggagtt
gagagactgcaaagacttctggaacaaagtcaaaagagcctgtcagaaaaggaggtcatg
gctttggtggacgcctcgaccgtcctcctgaaagacaacaacttcaaagtatgtcaaggg
acgctacatcttttaacgttggcggcagtcatgtctggggaatatttgagggttcactac
aatcaactggtaccagctgtagtggagcgtttaggtgataacaagcagactgtgcgtgat
gcgagccgcaggcttctattggctctcatggaggtttcgacaccttccataattgcggat
agagctggcagttacgcttggacgcataaaaattggagggtgcgcgaagagtttgctcac
actatagcatcagctttcaatttgttttcttcaacaggttttcatttccagcgaatgcat
ttgccagcgaatcttcagttattggaagactccaatagcaacgtgagggaggcagcactg
gtttgcctagaggagatgtatcggcatggtggacagaatgtcaaggatgaacttcaacga
catcatttgcgtcctgcgctgatgaaggaaatttctttccggtttgataggatagaacct
accaagcagctagacaatgagcatgcaactaccagtggcgtaggtcgcagtaaccaccga
aactcttgccacagtcctgtatccccaattcttcactccaatgtggaaacaaaagtctgt
cattttggaggaaatcagcgaccccataggcgatgcagtccgaagtataaatcaatgctc
tctactgatgtccacctgggaggtggaagtggaggaaatgataaacccgttggtcctatt
aaagtattttctgagagggagctgacgaaggagttggacaaaattgtcagcttgctcaaa
gctgaacaggagtggtctgttcggatggcagctatgcagaagttggaaggaattatcgtt
ggaggtgctgtggagttcgggtgctttttgacgctcttcaagaattttacaggtcctctc
agcggtcaattgttagatcggcgttctagcattgtgaagcaggcatgtcaacttctgaat
ttgctttcgaagcaatttcaaatcgattttgagtcctttgcagaagtattcatacctgtt
cttttcagatctgttgtagttactgtgcttgtaattggagaatcagcagaccattgcata
aaaacgatgctagagaattgccgcgtggcacgtgtacttccccgaattatcgagtgcgca
aagcatgatcgaaatgccattttgcggacaaagtgttgtaattatgctttgctggtcctt
gagaagtggggggattctccagagcttcatcgaatctctgatctttatcaggaattgatt
agatgctgcactcttgatgctgtagctgaggttcgctcaaatgcaagggcgtgttaccaa
gtatactcaaaattatggccagaccgtgcacgccgagttttctcattacttgaccctgca
gttcaaaagctctatcatgacgaagaagtaaacagacgatacttgttttcgcctgcgaag
gatttggggggtgacgaatttaatcagctgcggcgatcgacccgaatgtctgttcattca
gtacaaactttgaagggagaaacttcaaatgataggagtaaacgtttagtgcccggttct
gaaccatcaactgcttcaaatctgttgctaagaaaatctcttgacatatcctccgatatt
atcccagagaagatgctggaagccagtcagctgaacgctatcgatacaacgtccaagggc
gtcgattcccctgaaggtgttgtttatgcaccaggacgcatagccggtgggagttatcta
gaaattcatgcacctacacccacaggaaccatgcgagtaatcgctgattcgccgtctgct
cgcgacccaccacatcccgcatctgctcctgcatcctgtcattgcaatgcactacagttt
aaagtttctggctatagcagttttactggctcgtccactaccatacccgcatctgccggt
ttagaggatagaaaagaagaggagcatgagaacaacagtctggaaataaaaagtaaaatc
cttaacgcaacggttggaggggcttcagttgggtccccaggtgccaatcgagtcttgtca
tctactgaaacgccttgctacaacgtctttgagggaagtttcatggacagggaaatcaag
cagaatccaattttagatgttcacatagaaaagctacgaatcgcagattcatcctccagc
atcggatcgctgtcccacaggataagctggagacatacagcgtctggaaagtcgtcagaa
tgtactagtgggggaaatattcaccaacctggaggtctgaatccccaagcagaaatgttg
aattacatggacggggtgatgtctttgaatgatgctttaactgaaggattgggacctaac
gcagattggtctgcaagagtcgctgcatttacgtacattcaaaagttgctacaacaaggc
tctaaaggttcacaagaagtggcgcagaattttgatcggatgatgaagcttttcactaca
cacttggatgaccctcattggagagtaacacaagcagccctctcggccttgatagagctc
gtgcggacatcacgaaggatgtttgaaccatatttggagaggaccctaccatctgtattt
gcaaggctagtggattctaaagactccatccgccaacttggcttatcggctttggagacg
atcggtgacacatataccattgacaccttgctgctgccactactgcgttcgattgatgag
caacgtataccgaaggccagaatgacagtgattgagttcgcaattgctgcttttgcaaga
ctagcaaacgatggctctggaacaggttcaactggtctacttaaactctggcttgccaaa
cttgctccgttagctaacgataaaaatgcaaagcttagggaggcagctattgcgggtatt
atatctgtctactcccaattcgatccaaccatagtattaaatttcatcttagggttgtct
attgaggaacaaagcatgctacgaaggtcattgaagcagtttactccgcgcattgatttg
gatcttatggcattccttcataacaaggttcaaaggccaagaacaaagcctgtacccgat
caaacagatgctaccaggggtacagttgaagagtccacaggtagggcattgtcagcttta
actggtgatgacgctgagataagaggttcttccatttaa
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