Physcomitrium patens (spreading earthmoss): 112279895
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Entry
112279895 CDS
T01041
Name
(RefSeq) cell division control protein 48 homolog A
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112279895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112279895
03009 Ribosome biogenesis [BR:
ppp03009
]
112279895
04131 Membrane trafficking [BR:
ppp04131
]
112279895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112279895
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112279895
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112279895
Membrane trafficking [BR:
ppp04131
]
SNARE
SNARE associated proteins
Others
112279895
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112279895
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112279895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
AAA_17
Mg_chelatase
AAA_18
AAA_lid_PRS2_C
ABC_tran
IstB_IS21
Vps4_C
Viral_helicase1
ATPase_2
Parvo_NS1
AAA_7
NB-ARC
ResIII
TsaE
NACHT
Zeta_toxin
DUF815
Sigma54_activ_2
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
112279895
NCBI-ProteinID:
XP_024370399
LinkDB
All DBs
Position
3:4770343..4775648
Genome browser
AA seq
815 aa
AA seq
DB search
MATPAAAHPGEPSDPKPSSKKDFSTAILERKKAPNRLIVDEAVNDDNSVVALNMETMEKL
QLFRGDTVLIKGKKRKDTVCIVLADDTCDEPKIRMNKVVRANLRVRLGDVVSVHQCADVK
YGKRIHVLPFDDSIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETD
PAEYCIVAPDTEIFCEGEPLRREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLF
KSIGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAF
EEAEKNAPSIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRP
NSIDPALRRFGRFDREIDIGVPDEVGRLEVVRIHTKNMKLAEDVNLERIAHDTHGFVGAD
LAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGISNPSALRETVVE
VPNTTWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA
IANECQANFISVKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIANQRGSSQ
GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDE
ASRLRIFQAALRKSPIAKEVDLQALAKFTQGFSGADITEICQRASKYAIREDIEKDIERE
KRRAENPEAMEEDEVEEVAQIKARHFEEAMKFARRSVSDADIRKYQAFAQTLQQSRGFGS
EFRFADRPAAATGAPYAAETTPAFGGAADDDDLYN
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccgcggccgcgcatcccggggaaccctcggaccccaagccatcttcaaaa
aaggatttttctactgctatcttggagcgcaagaaggctcctaatcgtttgattgttgac
gaagctgtgaacgatgataactctgtggtagcattaaacatggagaccatggaaaagctg
cagctttttcgtggagacactgtgctgattaagggcaagaaacgcaaggacactgtgtgt
attgtgttagctgatgacacttgtgatgaacctaagatacggatgaacaaggtggtgaga
gccaatcttcgggttcgcctaggagatgtggtgtcagttcaccaatgtgcagacgtgaaa
tatggaaaacgtatccatgtccttccatttgatgattcaattgaaggagttactggaaac
cttttcgacgcttacttgaagccatacttcctggaagcttacaggccagttcgcaaaggt
gatttattcctggtgcggggaggtatgaggagcgtggagtttaaagttgtagaaacagac
cctgcagaatattgcattgttgcgcccgatactgaaatcttttgcgagggcgagcctttg
aggcgcgaggacgaggaaagattagatgaagttggttatgatgatgtgggtggagttcgc
aagcagatggcgcagatccgcgagctcgtagagttgcctctacgacatcctcaactcttt
aagtccattggtgtaaagcctcccaagggtattttgttgtttggtcctcctggttcagga
aagacattgatcgctagggcggtagccaacgaaaccggagctttctttttccttattaac
ggtcctgagatcatgtcaaagttagctggtgagagcgagagtaatttgagaaaagctttt
gaggaggcagagaaaaatgcgccgtccatcattttcattgatgaaatcgactctattgca
ccgaagagggaaaagactcaaggcgaggtggaaaggcgaattgtgtcccagttgttgaca
cttatggatggcttaaagtcacgtgcccatgtcattgtcatgggagctaccaaccgtccg
aacagtattgaccccgctctacgtcgttttggacggtttgatcgtgagatcgatatcggt
gttccagacgaagttggccgactagaggtagttcgtatccatacgaagaacatgaagctg
gccgaggatgtcaacctggagaggattgctcatgacactcatgggtttgttggagctgat
ttagctgcactatgtacagaagcagcactacaatgtattcgtgagaagatggatgtgata
gacttggaagatgaaacaattgatgctgaagtgcttaattctatggctgtaactaatgag
cattttcagactgctcttggcatcagtaacccctctgcacttcgggaaaccgtggtggag
gtgcccaataccacctgggaagacattggaggtctggagaatgttaagcgggagctacaa
gagactgtgcaatatccagtggagcatcctgagaagtttgagaaatttggaatgtcacca
tcaaagggagtgttgttttatggtccacctggatgtggaaagacgcttcttgccaaggca
attgcgaacgagtgccaagctaattttatcagtgtgaagggaccagagttgttgaccatg
tggtttggtgagagtgaagcaaacgtgcgcgatgtgtttgataaggctcgccagtcagct
ccttgtgtccttttctttgatgagctggactcgatcgcaaatcagcgtggcagtagtcaa
ggggatgccggtggtgcagctgatcgtgtcttgaatcagttgctcacagagatggatggt
atgaatgctaaaaaaacggtattcattattggtgcgacgaacagacctgatattattgat
tccgctcttctccgacctggacgtttggatcaacttatttatattccactaccagatgaa
gcttctcgtttgagaatcttccaggccgctttgagaaagtcgcctatagcgaaagaagtg
gatttgcaggctttggcgaagtttacacaaggttttagcggtgcagatataactgaaatt
tgccagcgtgcctccaagtacgctattcgtgaggacattgagaaggacattgaaagggag
aagagaagggctgagaatcctgaagccatggaagaagacgaggtggaagaagttgcacaa
atcaaagctcgtcatttcgaggaagccatgaagtttgctcgccgcagtgtgagcgatgct
gacattcgcaaatatcaagcatttgcccagactcttcagcaatcacgtgggtttgggtcg
gagtttcgattcgcagatcgccctgccgctgccactggagcaccctatgccgcagaaacc
actccggcatttggtggtgctgcagatgacgatgatttgtataactag
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