Physcomitrium patens (spreading earthmoss): 112279917
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Entry
112279917 CDS
T01041
Name
(RefSeq) syntaxin-32
KO
K08490
syntaxin 5
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112279917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112279917
Membrane trafficking [BR:
ppp04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
112279917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
FH2
Use1
Myb_DNA-bind_3
GIT1_C
COG6_N
Motif
Other DBs
NCBI-GeneID:
112279917
NCBI-ProteinID:
XP_024370447
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All DBs
Position
3:16332979..16335975
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AA seq
357 aa
AA seq
DB search
MPIAMGPLPSTLGRDRTSEFHAILDRLRKTQGSTLPYTNGAKCSTTNGHADETARLLPQA
TGALQSEFNKRASQIGLSIHQTSQKLSKLAKLAKRTSMFDDPAVEIQELTSVVKQDITAL
NAAISDLQKLCDSRNDGANQSKQSSEHSATVVDTLKSRLMNTTKEFKDVLTLRTENLKVH
DNRRQLFTASPNKQVNPYARQGPLASAVPSSASSTGASLPPWSNGTGRSNELFSSRRRPT
ADGLESSQSQGRLQQQQQQLVPVQDSYMQNRAEALQNVESTIVELSSIFTQLASMVAQHG
EIAIRIDENMDESLSNVEGAQTQLLKYLDSISSNRWLILKIFMVLIAFLLIFVVFVA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcaatgggaccattgccgtccactttgggtcgagatcggacttctgagttt
cacgccatcctcgatcgcttgaggaaaacgcagggatcgacgttgccctacacgaatggc
gccaagtgctcgacgacgaacgggcatgccgacgagactgcccgtcttttgccgcaagcg
acgggtgccttacagtcggagttcaacaaacgagcgtcgcagatcgggcttagcattcat
cagacctcgcagaagctctccaagttagccaaattggcaaagcgaacatctatgttcgat
gatccggcagttgaaattcaggagctcacttcagtcgttaaacaggacattaccgcatta
aacgcagctatatctgatttgcaaaagctttgcgattcaagaaacgatggagcaaaccaa
agtaaacagagcagtgagcactctgcaacagtcgtagacacgttaaagagtcgtcttatg
aacactacaaaggagttcaaggatgtccttactttacgaactgagaatctgaaggttcac
gataatcgacgacagctcttcacagcttctccaaataaacaggttaacccctatgctcgg
caggggccactagcatctgctgtccctagttccgcttcaagcactggtgcttctcttcca
ccttggagcaatgggacggggagaagcaatgaacttttcagctcaagacggcgtcctaca
gctgatggactggagagttcgcagtcacaagggcgtctgcagcagcagcagcagcagtta
gttcctgttcaggacagttacatgcaaaatcgtgccgaggctcttcaaaacgtagagtcc
accattgtggagttgagtagtatttttacccagttggcctccatggttgcccagcatgga
gaaattgctatcaggattgacgagaacatggatgagtctctttcaaatgtcgaaggagca
caaactcagcttcttaagtaccttgacagcatctcatcaaatcgatggcttattcttaag
atctttatggtgttgatcgcattccttttgatttttgtcgttttcgtagcttag
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