Physcomitrium patens (spreading earthmoss): 112279963
Help
Entry
112279963 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112279963
03015 mRNA surveillance pathway
112279963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112279963
03041 Spliceosome [BR:
ppp03041
]
112279963
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112279963
Spliceosome [BR:
ppp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
112279963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
AlgF
Motif
Other DBs
NCBI-GeneID:
112279963
NCBI-ProteinID:
XP_024370559
UniProt:
A0A7I4DCU6
LinkDB
All DBs
Position
3:complement(20667892..20672956)
Genome browser
AA seq
752 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKMKKLLKSQKFAPELDVTIDTSKVQMDVIKPWVATRVTELL
GFEDEVLINFIYGMLEEKNVDGKHVQIQLTGFMEKNTGKFMKELWSLLMSAQSNVSGIPQ
QFLDQKAEETRLKKAESERIAAELQRKRDLDKVAEDERQREKDAAAEAAKKVKEANGFAD
KDRVPKHSDDIRSRRGNGQFRRSVSKVRSSPGRDSRRRQRSKQSSDSSLSRYSRSVSRSP
RRRRRSFSPGRPSRVSRVVRSPVRRNYSRSPIRRRKSPPAHRSPVRRRYASRSPPARRSS
SYSLSPAPRSRARSPRRRNGGHLRREFRSPERVDRPGGRERRLSSSPGFRGPEPHQIPPV
ALRRPTGFGDRATPPDGDDWRAVSDRDGIGSTGNKRVLGDKDEKIVGVVEASEVASDKKM
HSGVDERKSGSDRGVREKKDNWSHSGLNEEEGESRRGGRDVDGEKRLFTDMEERRSGYHR
SDKNTRERWVHNDSNEGQKESPRARTGVPGEKRPHSEIERNTGVDRSGSDSREVGRYYDD
NGKSVLDRFRKDGGNGKRDMDFRREDRYFTDQRDRPTMRERSPLPDRQQVRKETRGSRKV
VETFQSPSKERKSEDYGRRSVDFDDDDSGVVRENVSKKSRVQKAEDDGFARDNDEDSFSP
RGSEERRKEEKRRRKEEKRLRREERHKRKREEKQKRKDKKLSMSTGGLNGEDKIDNHEGT
EQIEGEYDQKQRENELRHAALESLRAKKAISH
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtttttttcggggaacgtccgcggatcaggatactcgtttttctaataag
atgaaaaagttgctgaagtctcagaaatttgcgcccgagcttgatgtcacgatcgacacc
tcaaaggttcaaatggatgttattaaaccctgggtagctactcgagtgacggaactactt
ggctttgaagatgaagtcttaattaattttatatatggtatgctcgaagaaaagaatgta
gatggaaaacatgttcagattcagcttacaggcttcatggagaaaaatacgggaaaattc
atgaaagagctttggagcttgttgatgagcgctcagtccaatgtcagtggtattccgcag
caattcttggatcaaaaggctgaagagacccgccttaaaaaggccgaatctgagcgcatt
gcagccgagcttcagcgcaagagggatctcgacaaagtagctgaggacgagcgacaacgt
gaaaaagacgcagcagcagaggctgcaaagaaagtcaaggaagctaatggatttgctgac
aaagatcgggtccctaaacattctgatgacataagatcgaggcgggggaacggacaattt
agaaggtcggttagcaaagttcgatcttcacccggccgagattctagacggcgccaacgt
tccaagcaatcatcagattctagtttgtccaggtattctcgaagtgtttctcgatcacct
cggcgacgtcggagatctttttcacctggtcgaccgtctcgtgtctcaagggttgtacgt
tcccccgtgagacggaactactcacgatcaccgattcgtagaagaaagtctccacctgca
cataggtctcctgtgaggcgtcgttacgcttcacggtctccacccgcacgaaggtcttca
agttattccctttccccagcgccacgaagccgtgccaggagtcctcgtcgtagaaacggg
gggcatcttaggagagagtttcggagccctgagagagtggatcggcctggcgggagggaa
agacgtttaagcagttctccaggtttccgaggaccagaacctcatcaaattccacccgta
gctctccgtcgacctactggttttggagatagagcgactcctccagacggtgatgactgg
agagcagtgtcagacagagatggaatcggcagcactggaaataaacgtgtgcttggtgac
aaagatgagaaaattgtcggggtagtagaggcaagtgaggttgccagtgataaaaaaatg
cacagtggcgtagatgagcggaagtcaggatctgaccgaggtgtcagggagaaaaaagac
aactggtctcatagtggcttgaatgaagaagagggagagtctcggagaggtggtagggat
gtagacggagagaaaaggctttttactgatatggaggagaggagaagtgggtatcacagg
tctgacaagaacaccagagagcggtgggtccataacgattcaaatgagggtcagaaagag
tctcccagagcccgtactggtgttcctggtgaaaaacgccctcacagtgaaattgaacgc
aacacaggtgtcgacaggtctggaagtgatagtcgtgaggtgggcaggtattacgatgat
aatgggaaaagcgtcctggatagattcagaaaggatggtggtaatggaaaacgtgacatg
gattttagaagggaggatcgttacttcactgatcagagggacagacctactatgagagag
agaagtcctctaccagacaggcaacaggtacgcaaagaaacacgggggtcgaggaaagtt
gtcgaaacgtttcagagtccctccaaagagaggaagagcgaagactacgggcggcgatct
gttgatttcgatgacgatgactctggtgtggtcagggaaaacgtttcaaagaagtctaga
gtacagaaggctgaagacgatgggtttgctagagacaatgatgaagatagcttttcacca
agaggaagtgaagaaagacgtaaggaggagaaacggcgtaggaaagaagagaaaaggctc
cgccgagaggaaaggcataaacggaagagagaggagaagcagaaacggaaagacaaaaaa
ctttcaatgagtactggaggtttaaacggggaggataaaatagataatcatgaaggaacg
gagcagattgagggagaatatgatcagaaacagcgagagaatgaattgcggcacgcagcg
ctagagtcgctgcgtgccaagaaggccatatctcactaa
DBGET
integrated database retrieval system
