Physcomitrium patens (spreading earthmoss): 112280039
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Entry
112280039 CDS
T01041
Name
(RefSeq) long chain acyl-CoA synthetase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00061
Fatty acid biosynthesis
ppp00071
Fatty acid degradation
ppp01100
Metabolic pathways
ppp01212
Fatty acid metabolism
ppp04146
Peroxisome
Module
ppp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112280039
00071 Fatty acid degradation
112280039
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112280039
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppp01004
]
112280039
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112280039
Enzymes [BR:
ppp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112280039
Lipid biosynthesis proteins [BR:
ppp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112280039
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of breast milk
112280039
Exosomal proteins of breast cancer cells
112280039
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Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112280039
NCBI-ProteinID:
XP_024370731
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Position
3:15366080..15374658
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AA seq
664 aa
AA seq
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MGKIEYVVRVEKEEVGVDGDPSKGHVYRSLFAKDGFPPLPEGISTCWDIFERSKVKGPGN
NMLGVREMKDGKVRAGAYVWKSYEQVYDNVLQIGSAMRYVGVNPKGHCGIYGMNCPEWFT
AMEACNAQSIVCVPLYDTLGLTAVEYILNHAEIEIAFAQETKLPLIMKSLPNCTTFLKTL
VSFGAVTSDQRSKGQDAGVTIYAWQDFLDLGKKNKCDVTPPKKEDLSTIMYTSGTTGEPK
GVMLTHENVVNTIAGLDWYLKSLNEVMNKDDVYFSFLPLAHIFDRVAEEMFVFIGGSIGF
WQGDIKKVPEDIKELKPTLFVGVPRVFDRLTTGIQEKIAASGRIKNWLFQIGFSMKLFWL
KKGYKQDQASPFFDKLVFDKVKMGLGGRVRLVISGAAPLSGHVEKFLRVIMCAPVMQGYG
LTETCAASFLQVPDVISMNGTVGPPQPIIDVRLESVPELGYDALREDSPQGEICIRGKTL
FSGYYKRPELTEEVLINGWFHTGDIGEWQKDGALKIIDRKKNIFKLSQGEYVAVENLENV
YNESSSVDAIWVYGNSFESFLVAVAVPNQQALENWANSNGEEGDYATLCKSPKAQKFILS
ELTNMGKKKGLKGFEFIKAVHLDSQPFDVERDLTTPTFKLKRPQLLKYYQKEIDVMYNKI
KSNS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaattgagtacgtagtgagggtggagaaggaggaggttggcgtcgatggtgac
ccatcgaagggacatgtctatagaagcttgtttgcaaaagatggcttcccccctcttcct
gaaggaatttctacgtgctgggatattttcgagcgatccaaagtcaaaggtcctggcaat
aacatgctcggagttcgtgagatgaaggatggaaaagtaagggctggggcatacgtgtgg
aaatcctatgagcaagtgtatgataatgttctgcaaattggttcagcaatgcgatatgtg
ggagtcaatccgaaaggccattgtgggatttatggcatgaactgtccagaatggttcact
gctatggaggcttgcaatgcgcaaagtattgtttgtgttcctctttacgatactcttgga
ttgacagcagtggaatatatcttaaatcatgcagaaatcgaaattgcttttgcgcaagaa
accaaacttcctttgatcatgaagtctctccccaactgcactacatttttgaaaacctta
gttagttttggggccgttacaagtgatcaaagatctaaaggtcaggatgcgggagtcacg
atctacgcttggcaagacttcttggatctggggaaaaagaacaaatgtgacgtgacgcca
ccaaagaaagaggatttgtcaacgatcatgtatactagtgggaccacaggggagccaaaa
ggtgtaatgttgactcacgaaaacgtcgtgaatactattgcgggacttgattggtatctg
aaatctctgaatgaagtgatgaataaagacgatgtttatttctcattcttgccattggcg
catatatttgatagagtagctgaggagatgtttgtttttattggcggttctattggattc
tggcaaggggatatcaagaaggtacctgaagacatcaaagaattgaaaccaacattgttt
gttggtgttcctcgtgtcttcgacaggctaactacaggaattcaagaaaaaattgctgct
tcaggtagaataaaaaattggctcttccagattggattctccatgaagttgttttggtta
aagaaaggatataagcaagatcaggcatcgccattctttgataagctggtcttcgataag
gtgaaaatgggtcttggtggacgcgtaaggcttgtcatatctggagctgcaccactgtct
gggcatgtagagaagtttttgcgggtcataatgtgtgcacctgtcatgcaaggatatggt
ttgactgagacgtgtgctgcaagtttcctccaagttccggatgtcatctccatgaatggc
actgtgggccctccacaacccattattgatgtgaggctggaatctgttccggagttaggt
tatgatgccttgagggaggattctcctcaaggagaaatttgtattcgtggaaagacactg
ttttctggatattataaacgaccggagctcacggaggaggttcttatcaatggttggttt
cacacaggcgatattggagagtggcaaaaagatggtgctttgaagattattgatcgcaag
aagaacatcttcaagctttctcaaggagaatacgttgcagtcgaaaaccttgaaaatgtg
tacaatgagtcctcctctgttgatgcgatttgggtttatggaaacagtttcgaatcgttt
ctggtggctgtagcagtcccaaatcaacaagcattagagaattgggctaattccaatgga
gaggagggagattatgccactctatgcaagagtcctaaggcacagaaattcatcttatca
gagctgacaaacatgggcaagaagaaagggctgaaaggttttgagttcatcaaagcggtg
cacttagattctcaaccgttcgatgtagaacgtgatttgacaactcctacatttaaactt
aaacgaccgcaactcttaaaatactatcagaaggagattgacgttatgtataacaagata
aaatcgaactcctga
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