Physcomitrium patens (spreading earthmoss): 112280135
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Entry
112280135 CDS
T01041
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03420
Nucleotide excision repair
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112280135
09124 Replication and repair
03420 Nucleotide excision repair
112280135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112280135
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112280135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112280135
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
112280135
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112280135
TCR (transcription coupled repair) factors
Cul4-CSA complex
112280135
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112280135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
112280135
NCBI-ProteinID:
XP_024371001
UniProt:
A0A2K1KV89
LinkDB
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Position
3:13850435..13857512
Genome browser
AA seq
826 aa
AA seq
DB search
MSQKKRLSSSSSGGGGGISPNMISATKKPKNQQQTSILDQFDKNGKVGMAVEENTPDMMY
VDGVEDHLASTVSYPAGSVSAVTLSNNPGVGTTANLSRKKATPPPPAKKLVIKPFKDKPK
LPANFEEVTWVKIKEAVTAIHLKQPVNCSLEELYRAVEDLCVHKMAGNLYKRLQLECESH
ISIKLRDLAGRSPDAVVFLSHVERCWQDHCNQMLVIRSIALYLDRTYVIQNSGVRSLWDM
GLLLFRRHLSACPEVQSKTVSGLLRLIEEERMGESVDRSLLKHLLRMFSALGIYAESFER
QFLDCTSDFYAAEGTRFMQQTDVPDYLKHVETRLHEENERCLLYLDGSTRKPLVATAEKQ
LLSRHTAAILEKGFGMLMDANRVADLQRMYMLFTRVNALESLKMALSTYIKTTGNSTVMD
EEKDKDMVSWLLDLKARLDAIWDESFSRNETFANTLKDAFEHLINLRQNRPAELIAKFID
GKLRAGNKGTSEEELEGILDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKS
MISKLKTECGSQFTNKLEGMFKDIELSREINESFRQSAQARMKLPSGIEMNVHVLTTGYW
PTYPPMEVRLPHELNVYQDIFKEFYLSKHSGRRLMWQNSLGHCVLKANFPKGKKELSVSL
FQTVVLMLFNDAQSQSFQEIKDTTAIEDKELRRTLQSLACGKVRVLNKQPKGREVEDDDI
FVFNEDFVAPLFRIKVNAIQLKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHT
LLITELFQQLKFPIKPADLKKRIESLIDREYLERDKANPQIYNYLA
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaaaaagaggttgagcagcagcagcagtggagggggtggtggcatctcgccg
aatatgatatcagcgacgaagaaacctaagaaccaacagcagacgtcgatacttgatcag
ttcgataagaatggcaaggtagggatggctgtggaggagaacactcctgacatgatgtac
gtggatggtgtggaagatcatctcgcatccactgtatcatatcctgctgggtcggtgtcg
gcagtgacgttaagtaataatccgggagttgggactacggcaaacttatcgcggaaaaaa
gccacaccaccgccgcctgccaagaagttggtaatcaagcccttcaaagacaaaccaaaa
ttgcctgctaactttgaggaagtgacatgggtcaagatcaaggaagctgtaactgcaatt
cacctaaagcaaccagtgaattgcagtttggaggagctatatcgagctgtggaagatctc
tgtgttcacaagatggcaggaaatttgtacaagagattgcagctggagtgcgaaagtcac
atttcaatcaagctgcgtgatcttgcagggcgcagtcctgatgctgtggtgttcctgtct
catgttgaaagatgctggcaagaccattgcaaccaaatgcttgttatccgcagcattgcg
ctctatttagaccggacttatgttattcaaaattcaggtgttcgatctctatgggacatg
ggtttgctgctttttcgccgccacctgtcagcatgcccagaagttcagtctaaaacagtt
tctggtcttctcagacttatcgaggaggagaggatgggagagtctgtggatcggagttta
ttgaagcacttgctgcgcatgtttagtgctcttggcatatacgctgagagttttgagaga
caatttctagattgtacctctgatttttacgcagcggagggaacacgctttatgcagcaa
acagatgtgcccgattatcttaaacatgtcgagactcgtctccatgaagagaacgagcga
tgcttgctttatttggatggaagtacacggaaacctttggtggctactgccgagaaacag
cttctcagccgccatacagctgcaattctggagaagggatttggcatgctcatggatgcc
aaccgcgtggcagatcttcaacggatgtacatgctttttacacgagtaaatgctttggag
tctctgaagatggccttgagtacttacatcaagacaacgggcaacagtactgtgatggat
gaagaaaaggataaggacatggtgtcttggcttttagatctgaaggcccgtctggatgct
atttgggatgagagcttttctagaaatgaaacctttgctaatactttgaaggatgcattc
gaacatctcattaatctgcgtcagaaccgacctgccgagctcatagcgaaattcattgat
ggaaagctgcgtgctggcaacaagggaacgtccgaagaggagctagagggcatcctggat
aaagttttggtgctttttagattcattcagggtaaagatgtattcgaagctttttacaag
aaggatttggccaaacgtttgcttctggggaagagtgcctctattgatgcagagaaatcc
atgatatcaaagctcaagacagaatgcggcagtcaattcacgaataagctggaaggaatg
ttcaaggatattgagctttcacgggaaatcaatgaatcgtttaggcagtctgctcaggca
cggatgaagctgccttcagggattgagatgaatgttcatgttctgacaactggctattgg
cctacttatccacccatggaggtcaggttaccacacgagctgaatgtataccaggacatt
ttcaaggagttttatctgagtaagcatagtggacggcgtctgatgtggcaaaactccttg
ggtcattgcgtgctgaaggccaattttcctaaaggaaagaaggaactttccgtttctctt
tttcagaccgtggtgctgatgctcttcaacgacgcgcaatctcaaagcttccaggaaatc
aaggacacaactgcgattgaggataaagaacttcgaagaactcttcaatcattggcttgt
ggtaaagttcgagttcttaacaagcaaccaaagggcagagaagtggaagatgatgacata
tttgtcttcaacgaggattttgttgctcctctttttcgtattaaggtcaatgctatacag
ttgaaggaaactgtagaggaaaatacgagtacaacagagcgagtgtttcaggatcgtcaa
tatcagattgacgctgccattgtccggatcatgaaaacacgaaaagtgttaagtcataca
ttgttaataacagaactatttcagcagctgaaatttccaattaaaccagctgatctgaag
aagagaattgagagcctgatcgatcgggagtatctggaaagggacaaagccaaccctcaa
atatacaactatctggcttag
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