Physcomitrium patens (spreading earthmoss): 112280190
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Entry
112280190 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03260
translation initiation factor 4G
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112280190
03012 Translation factors [BR:
ppp03012
]
112280190
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112280190
mRNA cycle factors
Stress granule specific factors
112280190
Translation factors [BR:
ppp03012
]
Eukaryotic type
Initiation factors
eIF-4
112280190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
VPS13_N
Motif
Other DBs
NCBI-GeneID:
112280190
NCBI-ProteinID:
XP_024371148
LinkDB
All DBs
Position
3:24964625..24976325
Genome browser
AA seq
2317 aa
AA seq
DB search
MSHYQNKGDRSEAQLRKAGRGSAGHPRAGGGQSIPVKGGGPGPFNSAPSGGGPPQPSSSA
ASAVRPTAVAASTIRGGKRANGFSASGRGAPGGGSPEQGTNNKAQQQAALPLHHNNQQQQ
VATGLLQGLGSAETNQHAQMGAPQLNADSKSSTPARTSGSAGTGAPAVAKQLPTSKPPAP
PASQTTGSGADAASAAPPPVSQSSQNPFPFQFGSFEPSGFGGATTSGKSSATPYPLRTNS
APPNLDEQRRDQARFELKPLPSTRVSASGQQLNAQVITRNVAGGIEQPAPVMAPHVQVTT
SSQGPVSVASTAQALQPQQLGQTPQYPQHLQVNNLHMPSQHMLQIQMQHHHQQQQQQQQQ
QHQHQHQLHQQQLQQHQHQQQQQQQPMPPQQGMVQQSLKYPQSMMTAPHHNSQIIGTHPV
VNPLTQPPQMAQMTHQLGPGQIPSGISVGAYGAPANHLMAKQRSRAIPIVNPHTHEELKV
DLLKKDIVDSVPSSSLGTAGRIPSNGPIPQLRAPVGYNTPTHPVYYFSHPQMYPPSIPKT
GTFGGAPLSSSPPVRYSFNPPHPGQGVHAGTAPVPSGAPKVAPKLGPGPTLGSANPAPSS
GEVISTPPVAPLIMVGPPSAVAVPGIPAVIANLRPIPPTLGMNPPVVSNGRPPSLTLPSV
SPPAPLTPPAPLTPSSVLHSPNSIVGFKFGDVEASGSTPVVTGEASSEGSLNGIVGHVST
LSEPNKSIVGPPSVGVVTSSTSPGASVPVVNRPAVTVIPPKPGSGSSNASGVSPKIKTPT
GTGGAGTVGEKVKAEALKTTGNPNPRKTSKKDRQRQQQQTHAANLPVSEAEKTSDQLVSP
GSGSGVPGGHKSGLQRTQSGAHSSNAVYTPLKNLGSKPEEPKSSNVNAGVQTPVKDATSE
NTESQEHRGIVVEKDDVEADAVRLLREESKGAMSVESGISLKTDASVLISEGSTASTAST
CTPSLLVKEELTEPQVEELGAGEKGVPQDVGVSENPPAASSCSDQELVEPEIKSVEVESD
TVKSKPLISEVSDAVPIENEGVVKNPEPAVADMHEENAGIIEQVSLPSLEADDALTSKSA
ERRAPHLSDVEKEELIVIDTPTAPHSETAAGSEVTSGSEVVALKESGVSAVDVESVDEND
VAGVQVTRDEHIPEVVLEIPLLSDLGTCVIEDSLVSSQQDSATVLNTTEDIPQTVATAEE
VSQSDSLSVGMVAFPAEEVHSRDSLGALESTRGSLENGSENLRPLEHVESAASNSSKAED
TPPSVVEESGSDVQTTPLLSSTSGLSATEAIEAVNAVESEADAVEPAITGNPKLGSRKKK
SRKELLARADAAGNTADLYNAYKAPEEKKSVEVKRAEVSGADSSGSDSKDSVVTPDKSLP
NEVDDWEDAAELPTPTISVPHVVDTGDRKYTRDFLMTFKDQNRDYPSNFEIRHDIADVLL
DKDKLFSDGMTSTARNLDRQPSGGQRLERRGSGIQDEDRWIRQSGLVPSPGRNQPGDVRM
GMDMSGSYRSGPGMQSGLISQLPQQWPGMPSQAGFPSLIPRGPGNVPLAHYITPGPPARS
SIGVDGDRWLRQPMSGAKGPGLIPSPRTPLPAIHKAENRYEVGKVSDEEQAKQRLIKGIL
NKLTPQNFDKLFVQVQEAKIDSATTLTGVISQIFDKALMEPTFCEMYAQFCVKLAVDLPE
FNENDEKITFKRVLLNKCQEEFERGEREQEEAEKDEEEHIEVKMTAEEREDKRLKARRRM
LGNIRFIGELYKKSMLTERIMHECIKKLLGEYQKPDEEDVEALCKLMSTIGRIIDHHKAK
EHIDAYFRRMENLSNNSKLSARIRFMLKDVIELRRNGWQERRKVDKPKKIDEVHRDAVQE
RQNASRGDRLGRGPSMGGGGSRGRMGPGPDFGMRGPPSPMYSPGPMSAGPPMGGMRRAPS
PQGGMRGGGGFVQDVRMEDRSLVMDARPVPMPLSQRGADESNITLGPQGGLGRVGVRQQS
LSSGRSALLDAATTSGPDTRRLSLGSNFGHAQDRMHYSNRDELPMRPSSAERPRSAERPI
LDRPTGADRLSPGLRDLRSTPEQQRVMERSISLSAAPSTYQPHRTESTGPLGSARPSSAP
SALSDEELKKQWEVTISDYYSVTDLKEAASCVEELKAFKRHPEMVNIWVSESLEKKDRER
DLLAKLLLHLHRIDPPLLSRDHIEIGIDRVLSRFIDTVVDVPKAPEFLGILLGRLVSAGV
FTLNEVGNLLQVAGEKRGEVREEGLALPIFGAVLNTYREEKGEEQMVDAYKKSGLVVESF
VLPSENRATTVEQFLERKNLQKLQPVRERLSTFRANS
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattatcaaaacaagggagaccggagcgaggcacagctgcgaaaagctggaagg
ggcagtgctgggcacccaagagcggggggcggtcaatcgattcctgtgaagggcggaggg
cccggtcccttcaacagcgctcctagtggtggcgggccgccgcagccatcttcctctgct
gcctctgcagttcgtccgactgctgtggccgcttccaccatccgtggtggaaagcgtgcg
aatggattttctgcttctggcagaggcgccccaggtggagggtctccagagcaaggtacc
aacaacaaagcgcagcagcaggcggctttacctctgcaccacaacaatcagcagcagcaa
gtagcaacaggattgctccaaggtttaggatccgcagagacaaaccaacacgcacaaatg
ggagctccacaactaaatgccgattcgaaaagctcgacccctgccagaacctcaggaagt
gctggcaccggagccccagctgtcgccaagcaacttccgactagtaagccacctgctcct
ccggccagccaaaccactggctctggagcggacgcggcatctgctgcaccacctccagtt
tcgcaatcttcacaaaatccgtttcctttccaatttggaagtttcgagcccagtggtttt
ggtggtgctacaacaagtggaaagtcatctgccacgccatatccattgcgtacaaactct
gctccacctaatcttgacgagcaaaggcgtgatcaggcacgttttgagctcaagccgttg
ccaagcacacgcgtctcggcatctgggcagcagctcaatgcgcaggtgatcacaagaaat
gtggctggtgggatagagcaacctgcaccggtaatggcgccacatgtacaagtgactaca
agttctcagggacctgtatcggttgcttcaacagcgcaggcacttcagccccagcaattg
ggtcaaacaccacagtatcctcagcatctacaggttaacaacttgcacatgccatctcag
cacatgctccagattcaaatgcagcatcatcatcagcagcagcagcaacaacaacaacag
caacatcagcatcagcaccaattgcaccagcaacagctccagcagcatcagcatcagcag
cagcaacagcagcaaccaatgccaccgcagcaggggatggtgcagcaaagcttgaagtac
ccccaatctatgatgactgcccctcatcacaattcacaaattataggtactcacccagta
gttaatcctttaactcaacctccacaaatggctcaaatgacacatcagctaggacccggc
caaattccgtcgggtatttcagtaggagcctatggggctcctgcaaaccatttaatggcc
aaacagcgcagcagggcaattccaattgtgaatccacatacccacgaggaactgaaagtt
gatctattaaagaaggacattgtagacagtgttccttcgtctagtcttgggactgcaggt
aggattcctagtaatggtcctattccacaattgagagcccccgtgggatacaacaccccc
acacatcctgtgtactatttctctcatcctcagatgtacccgccaagcattcctaagaca
ggtactttcggtggcgcacctctctctagttccccgcctgtaagatacagttttaatcct
ccacatcctggacaaggtgtgcatgcaggaactgctccagtaccatctggtgctccaaaa
gttgcccctaaactggggcccggacctacgctagggtcagcaaacccagcccccagttca
ggagaggtcataagtacacctcctgtggccccacttataatggtggggcctccttcagca
gttgctgttccaggtattcctgctgtaattgccaatctcagaccgattccccctactctg
gggatgaatccgcccgttgtctctaacgggagaccgcctagcttgactcttccttcggtt
tcccctcctgcgccgctgacccctcctgcgccgctgaccccgagctctgtgcttcattca
ccgaactcaattgttggattcaagtttggcgatgtggaggcatcgggttccactccggtt
gtaactggtgaagcaagtagcgaaggctcactgaatggtatagttggacacgtctctaca
ctttcagaacctaacaagtccattgttggtccaccaagtgtgggtgttgtaaccagctcc
acctctcctggggcttcagtccctgttgtgaatcgaccagctgttactgttattcctccc
aaaccgggttcaggctcttcaaatgcaagtggtgtcagtccgaaaattaagactcccact
ggcacaggcggtgcaggaacggtaggggagaaagtaaaagcagaagctttgaagacaact
ggaaaccctaatccaagaaagacgagcaagaaggatagacaacggcagcagcagcagact
catgcagcaaatttgccagtctctgaagccgagaagacttcggatcagcttgtttcacca
ggttcaggttcaggtgttcccggcggacataaatcgggtttgcaaagaactcaatctgga
gcgcacagtagtaatgcggtctacacgccactgaagaatttgggaagtaagccggaagaa
ccaaagtcgtccaatgtcaacgctggtgttcagactccagtaaaagatgcaacctcagag
aacacagagtctcaagaacacagagggattgttgtcgagaaagatgacgttgaggccgat
gctgtgcggcttcttcgagaagagagcaagggagcaatgtcggtggaatccggaatctca
ttgaagacggatgcatcggtattgatttcagaagggtccactgcttccactgcttccact
tgtactccttctttgcttgtgaaggaagaacttacagagcctcaggtagaggagttggga
gctggggagaagggtgttcctcaagatgttggagtttccgagaaccctcccgcagccagt
tcatgttctgatcaggaactggtagaacctgagattaaaagcgttgaggttgagtctgat
actgtcaaatccaagccattaatttctgaggtcagtgatgccgtgccaattgagaatgag
ggcgttgttaaaaatccggagcccgctgtggctgacatgcatgaggagaatgcggggatc
attgagcaggttagcctcccatcgttggaggctgatgatgcgctcaccagtaaatctgca
gaacgacgggctcctcatttgtcagacgtagagaaagaggaattaattgtgatagataca
cccacagcaccacattcggaaacagctgctggaagcgaggtcaccagtgggagtgaggta
gtggcactcaaggaatcaggtgtatcggcagtcgatgtagaatcagtagatgagaatgac
gtagcaggtgtacaggtcactagagatgaacacattcctgaggtagttcttgaaattcct
ttactttcagatctgggtacatgtgtaattgaagacagtctggtttcttctcaacaagac
tcggcgactgttttgaacacaaccgaagatattccgcagactgttgcaaccgcggaagag
gtttcacagtcggattcattatcggttggcatggtggccttccccgctgaggaggtgcat
agtagggattcattaggcgcgctggagagcaccaggggttcacttgagaatggaagtgag
aatttgaggccattggaacatgtggagtcagcggcgagcaattcaagtaaagcggaagac
actcctccatcggtagttgaagaatctggatccgatgtgcagaccactccgttattgagt
agtacctccggactatccgccacagaagcaatcgaggctgtgaacgcagttgaaagcgaa
gcagatgcagtggaacctgcaattactggaaatcctaaattggggagcaggaagaaaaag
agcagaaaagagttgcttgcacgcgcagatgcagccggtaatacggcagatctttacaac
gcatacaaggcacctgaagagaagaagtcagtggaggtgaagcgagctgaggtttctggt
gcggattcttcaggtagtgattctaaggattcagttgtaactccagacaagtctttgccg
aatgaagtggatgactgggaggatgccgctgaacttccaacgccaactatatcggtccct
catgttgtggacactggtgatcggaaatacacacgtgattttctaatgactttcaaggac
caaaatagagactacccttccaactttgaaatcaggcatgatattgctgatgttttgctg
gacaaagacaaactttttagtgatggaatgactagtactgcgcgtaatcttgaccggcag
cctagtggtggacaacgattggagagaagagggagtgggatacaagacgaggatcgctgg
atcagacaatccggacttgtcccatccccaggaaggaatcaacctggggatgtacgcatg
ggcatggatatgtcaggtagctatcggtctggaccgggtatgcaatccggtttgatttcg
caactgccgcagcaatggcctgggatgccctcccaggctgggtttccaagtttgattcca
cgaggacctggcaacgtgcctctagcacattacattacacctggtccgcctgcccggagc
tcgattggtgtggatggagacaggtggcttcggcaaccaatgtcaggagcaaagggtcct
ggcctaatcccatcgcctcggactcctctgcctgcaatccacaaggcagagaacagatac
gaagtgggtaaggtgtcagatgaggagcaagcgaaacaaaggttaattaagggaatactg
aacaagctcacaccccaaaattttgataagttgtttgtacaggttcaggaagccaaaatt
gattctgccaccacactcactggtgtcatctcgcagatttttgacaaagcactcatggaa
cccacgttttgtgagatgtatgctcagttttgcgtcaaacttgctgtagacttaccagag
ttcaatgaaaacgatgaaaaaattacttttaagcgtgtcttgttgaacaaatgccaagaa
gaattcgaacgtggagaaagggaacaagaagaagcagagaaagacgaagaagaacacatc
gaagtaaagatgacagctgaggagagggaggataaacgtctgaaggcccggaggcgaatg
ttaggaaatattcgttttattggagaactctacaagaaaagcatgttgacggagaggatc
atgcacgaatgtattaagaagctgctaggagaataccagaaacctgacgaggaagatgtg
gaggctttatgcaaactgatgagcacaattggtcgaatcattgaccatcataaagccaag
gagcacattgatgcctatttcagacgaatggaaaacctttcgaacaactcaaagctttcg
gcccgtattagattcatgttaaaagatgtcattgaactccggaggaatggctggcaggag
aggaggaaggttgacaagccaaagaagatcgatgaagtgcatagagatgctgtccaagaa
agacagaatgcttcgcgtggggatcgtttagggcgaggtcctagcatgggaggaggaggt
agtcggggaaggatgggacccggcccagattttggcatgcgaggtcctccgtcgccaatg
tattctcctggtccaatgagtgccggaccacctatgggaggaatgcgaagggctccatct
ccacaaggggggatgcgcggcgggggtgggttcgttcaggatgtaagaatggaggataga
tccctggtaatggatgctcgacctgtaccaatgcccctgtcccagagaggtgctgatgag
agcaacatcacattgggcccacaaggtgggctcggcagggtgggtgtccgccagcagtcg
ttgagttctgggcgaagcgcgttattggatgcggcaactacgtcaggtcctgatacgcgt
cgtttaagtttagggtcgaattttgggcacgcccaagacagaatgcattatagtaatcga
gatgaacttccaatgcgaccttccagtgcagaaaggcctagatcggctgaaaggcccatt
ctagacagaccaactggagctgacaggttgagcccaggtctacgcgacctgcgaagcaca
ccagagcagcaaagagtcatggaaagatctatttcattgagtgcggctcccagcacttac
cagccgcatcggacggagtctaccggacccttggggtcagctcgtccatcttccgcgccc
tccgctttgagtgatgaggaacttaagaaacagtgggaagtgaccatcagtgattactat
agcgtgacagaccttaaggaagcggcatcgtgtgtcgaggagctgaaagctttcaagcgc
catcctgaaatggtgaatatctgggtgtcggagtctttagagaagaaagatagagaaaga
gatctgctcgcgaagttgcttctgcatcttcacagaatagatcctcctctactatcgcgt
gatcatatcgaaattggcattgaccgagttttgtcaagattcatagatactgtagtggat
gtcccaaaagctccagaattcttgggaatcctgttaggtaggctagtctctgctggagta
tttactttgaatgaggtaggcaatctgttacaagtggctggtgaaaaacgtggagaagtt
agagaggagggcctcgccttgcccatttttggtgctgtgttgaacacctatcgggaggag
aaaggcgaagagcagatggttgatgcttacaagaaatccggtctcgtcgtggagagcttc
gtgctaccatctgaaaacagggcaactacggtggagcagtttctggaaagaaagaactta
cagaagctgcagccggtgagagaaaggctgtctacgttccgtgcaaattcctga
DBGET
integrated database retrieval system
