Physcomitrium patens (spreading earthmoss): 112280279
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Entry
112280279 CDS
T01041
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112280279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112280279
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
112280279
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112280279
Multi subunit type E3
ERAD complex
112280279
LMBR1L-GP78-UBAC2 complex
112280279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_UBOX
CUE
zf-rbx1
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_16
Serglycin
RINGv
PHD
Motif
Other DBs
NCBI-GeneID:
112280279
NCBI-ProteinID:
XP_024371352
UniProt:
A9SFR3
LinkDB
All DBs
Position
3:7355551..7360481
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AA seq
590 aa
AA seq
DB search
MGVGYGPVVALYTALSLSGIAWKLNSALRSTFDKDLQGLDPIEADRTLQALLQSSVVVAL
LANLMVNCFLLITLSMKTIFFGQLSLVETQKVVERLINYVLFKGLFLTWVVRPEMMQIAV
WLAWFSVLGFLKMFLGLARDRLERLNASPSATVFSHLRIYAVLLFVLLFDLLWMHLCLLL
FKDIGTSTFLLLLFEPLSIASDTLQAVIVHGMQLMDTWQRQSLDVSAHDVNLQPSERSAA
GAAWEWRGTVVRNCSFVMDIVSLLLALGHCVHIWWLRGLAFQVVDAILFLNLRALLSAIS
KRIKGFMRLRTAMTTLQGALPDATQEQLLAYEDDCAICKEPMARAKRLPCAHLFHLPCLR
SWLDQGLAETYSCPTCRRPLFMGGSRTATQNLQRLVDAATTSPGTNETQAQVPQRQDLAP
LASPPLANLVPPLTPHWNAPVTSTWTGTAEEVGPVGVVGGIDEANRSTDAQNTGGGLGRL
HLMMRQLSGSGSGPGLGHSHGHGLVEESNWNWWPFGGESSVQSSRRSRDEAVDALLLRNN
VSTGLGTVADPRISAMVGMVREVLPHVPDELIAQDLLRTNSVTATVNNFL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggggtaggttatgggccagtagttgcactatataccgctttaagtctaagcgggatc
gcttggaaacttaattcagctctgcggagcactttcgacaaggacttgcaaggcctggat
cctattgaagcagatcgcactcttcaagctttacttcaatcatccgtcgtggtggcctta
cttgcgaatctcatggtcaactgtttccttctgattacactttcgatgaagactatcttc
tttggacagttatcactagtggagacacaaaaggtggtagagcgactcatcaattatgta
ttgttcaaggggctattcttaacttgggtagtaagaccagaaatgatgcaaattgcggtt
tggctcgcatggttttcagtcttggggttcctgaagatgttcttaggtttggcgagggat
cgtctggagcgtttgaatgcatctccatctgcaacagttttctctcatctaagaatttat
gcagtacttttgtttgttcttctcttcgacttactctggatgcatctgtgtttattattg
ttcaaagatatagggactagcaccttcttgttactgttgttcgagcctctcagtatagca
tctgatactctccaggcagtaatagtacacggtatgcagctaatggacacttggcaacgg
caaagtcttgatgtatctgcgcacgatgtgaatttgcagccttctgagaggtctgctgca
ggtgcagcttgggaatggcgtggaactgttgtacgaaattgcagttttgttatggatatt
gtgagcctgttgctggcactgggccattgtgttcacatctggtggctacgcggtcttgct
tttcaagtggttgatgccatcctattccttaacttgcgggcattactgagcgctatctca
aagaggataaaaggtttcatgcgtctccgtacagccatgaccaccctgcagggagcgctt
cctgatgctacacaggagcagcttttggcgtatgaagatgattgtgcaatttgcaaggaa
cctatggctagggcaaaacgtctcccctgtgctcatctctttcatcttccgtgcttgaga
tcttggctagatcaaggactagcagaaacgtattcttgtccaacctgtcgtagaccactc
tttatgggtgggtcacgaactgcaacacaaaatttgcagcgtctagtagatgcggccact
acatcccctggcacaaatgaaactcaggcgcaggtaccacaacgacaagacttggcccca
ttggcatcgccacctcttgctaatttggttcctccacttacacctcactggaatgcccca
gtgaccagcacgtggacgggtacagcggaagaggttggcccagttggagtagtaggaggt
atcgacgaagcgaataggtcaacagatgcccagaatacagggggtggtcttggtcgcttg
cacttgatgatgagacagttatccgggtcgggatcagggccaggattaggacatagtcat
ggccatggccttgttgaggaaagcaactggaattggtggccattcgggggggaaagtagc
gtacagtctagcaggcgcagtagagatgaagctgttgatgcgttgcttttgcgcaacaat
gtctcaactggattgggcactgtagcggatcctagaatttctgcaatggttggcatggtg
cgtgaggttcttccgcacgtccccgatgagcttattgcacaggacttgctgcgaacgaat
tctgtaacagccactgtcaataacttcctatag
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