Physcomitrium patens (spreading earthmoss): 112280507
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Entry
112280507 CDS
T01041
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112280507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112280507
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112280507
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112280507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-Di19
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112280507
NCBI-ProteinID:
XP_024371828
LinkDB
All DBs
Position
3:23691630..23693632
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AA seq
306 aa
AA seq
DB search
MAPSNAKMEIPESPIREGDTPSSTESETESGVVSKSTLPVARKPAGTPSSSVHELLECPV
CTNSMYPPIHQCPNGHTLCSNCKQRVHNRCPTCRYELGNIRCLALEKVAESLELPCRYQS
LGCPDIFPYYSKLKHEAQCTYRPYNCPYAGSECSVTGDIEWLVAHLRDEHKVDMHNGFTF
NHRYVKSNPQEVENATWMLTVFNCFGQHFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKNF
SYSLEVGANGRKLVWQGVPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG
RIWKEQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctccatccaatgcgaagatggaaattccagaatcaccaattcgagagggtgacacc
ccttcgagcactgagtcagagacggagtcgggagttgtttcgaaaagcactttgcctgtg
gcccggaaaccagctggtacaccatctagtagtgtccatgaacttctggagtgtcccgtg
tgcaccaattctatgtatccacctattcatcagtgcccaaacggacatacattgtgttcc
aactgcaaacaaagggtacacaatcgctgcccaacttgcaggtacgagctcggcaatatc
cgctgtctggctcttgaaaaagtggcagaatctctcgaattgccatgtaggtaccaaagt
ctggggtgtccagacatattcccttattacagtaaactcaagcacgaggctcagtgcaca
taccggccctacaattgtccatatgccggatcagagtgctcagtaactggggacattgaa
tggcttgtggctcatttaagagatgaacacaaagttgatatgcataatggattcaccttt
aatcatcgctatgtgaagtctaatccacaagaggtcgagaacgctacttggatgctgacg
gtattcaattgctttggtcagcatttctgtcttcatttcgaggcttttcagcttgggatg
gcccctgtctacatggctttcttgcggtttatgggggacgacaatgaagcgaagaatttc
agctacagcttggaggttggagcgaacggacgaaagttggtttggcaaggtgtacctcgt
agtattcgtgacagtcaccgaaaagttcgcgacagtcatgatggtctcattattcaaagg
aatatggctctttttttctcaggtggtgatcgtaaagaacttaaacttagggtgacaggt
cgtatctggaaagagcagtag
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