Physcomitrium patens (spreading earthmoss): 112280687
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Entry
112280687 CDS
T01041
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppp03036
]
112280687
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppp04812
]
112280687
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
112280687
Microtubules and associated factors
gamma-tubulin ring complex
112280687
Cytoskeleton proteins [BR:
ppp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
112280687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_EML
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_Gbeta
EIF3I
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_Aladin
CFAP251_N
WD_LRWD1
Beta-prop_VPS8
NBCH_WD40
NYD-SP28_assoc
Motif
Other DBs
NCBI-GeneID:
112280687
NCBI-ProteinID:
XP_024372253
UniProt:
A0A7I4FMS7
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Position
3:complement(1845433..1853529)
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AA seq
812 aa
AA seq
DB search
MAQGTSLLAACGGETVKLFDVSIETGDPCTFQYTPSPGYHVNCARWNHTNLVVASAGEDC
KISLWMKNGHSIGVVPQPGGEADDNIDESILGICFSSKGSRYLGSGGTGKVVRVWDLQRR
RCIKWLKGHTDTITGVMYNCKDEHLASISMKGDLIIHNLASGTRAAELKDPNNQVLRVME
YSRLSRHLLLTAGDDGTVHLWDTTSRSPKLSWLKQHSAPTTGLCFSPTSDKMIVSAGLDK
KLYTYDPGVKKPVYCVPYEAPFASLAFRDDGNTLAAGTNSGRVVFYDVRGRPQPFTILRA
YSASEAVTSLSWQRSNPTTVKDTRSGETALLGDSNEESVIMPDPLPAGTRGRITSGAPPS
KPSNRINSFSSQEPASAIGGHSGISRPKSAGGDVTPYSSMRAWGNGPMSRHQTPRMNALI
SGKDDMEVFSPLVDVQPITPSVTGYWEGGVAGDEFNRDMAALDGDNRRKTTWGTPLVRRF
PNIEDVKEDVRESRESRDSSVSRRSSLGSRQDDLQGRMSVTPPPGISSRLDRSPSLTPPE
AWGGEPLERGGLRQPTMSRFASTTGLPSSRFDSLAASADNKQSSSTKGDIPLLRSLEQDS
SSPLTNGVGHQPAMVPASDFEAGTLAANRKLMSFEARDLNSSLSRALPGSFPRSAVDSGS
PKQKKPGLERREDSGGVSGSSDGKDLENGYALRSDAAGSIGPTPPTSNGHGHGHGSVQRA
QTPLEQHQQQHGIGTTGFALQLVQRGLEESLGAVQRAIHEEVQNVHLELLRQFHIQQMEM
SSMMDSFLEKQAELVEEVKALRRENQQLRDLY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagggacgtcgctgctggcagcttgcggaggcgaaacagtgaagctgttcgac
gtgtctattgagacaggggatccctgcacgttccaatacactccttctccgggttatcac
gtcaattgcgcgcgatggaaccacaccaacttggtggttgcgagtgctggagaagactgc
aagatttcgctgtggatgaagaatggtcacagcataggtgttgtgcctcagcctggtgga
gaagcggatgacaatatcgatgaatctattctaggaatttgtttcagcagtaaaggatct
cggtatcttggttcaggaggaactggtaaggttgtccgtgtatgggatctacaaaggagg
agatgcatcaagtggttgaagggtcacaccgacactatcactggtgttatgtacaactgt
aaggatgagcacttggcttccatcagcatgaagggtgacttgattatacacaaccttgca
tcaggcacccgggcagcagagctcaaagatcctaataatcaggttctcagagttatggag
tactcccgattgagtagacatttgctactgactgctggtgatgacggtactgtccatttg
tgggataccacttcacgtagtcccaagttgtcttggctgaagcagcactcagcacctacc
acaggactctgtttctcacctacatctgacaagatgattgtaagtgctggactggataag
aaattatatacatatgatcctggtgtaaaaaagcctgtgtactgtgtaccatatgaagct
ccttttgcatccttggcttttagagatgatggcaacacattggcagctggtaccaatagt
ggtcgggttgtgttctatgatgtgcgtggtcggccccaacccttcacaatcctgcgagct
tacagtgcttccgaggcagtaacaagtttgagttggcaacgttcgaatccaaccactgtc
aaagatacaagatctggagagacagctcttttaggtgatagtaatgaagaatctgtcata
atgccagatccacttcctgctggcaccagggggcggataacatccggtgctccacctagt
aaacctagtaatcgtattaattcgttttcaagccaggaacctgcttcagctatcggtggg
cattcgggtatctcaaggccaaagtcagcaggaggagatgttacaccttattcttctatg
cgtgcatggggaaatggtccaatgtctagacatcaaacccctcggatgaatgcactcatc
tctggtaaagatgacatggaggttttttcacctcttgttgatgtacagcccattacgcca
tcagttacaggttattgggaaggtggggttgctggagatgagtttaacagggatatggca
gctcttgatggggacaatagaagaaaaacaacctggggaactccattagtccggcggttt
cctaacattgaggatgtgaaggaggatgtacgggagtcgcgtgaatctcgtgattcaagt
gtttcacgcaggtcctccctaggatcacgccaggatgatttacagggaagaatgtcagtt
actcctcctcctggaatatccagtaggttggatcgatctccatcgttaacaccccctgag
gcatggggtggtgaacctttggaaagaggcggcttgagacaaccaacaatgtctaggttt
gcatcaactacaggacttccatcatcccgttttgattcactagcagcttctgcagataat
aaacaatcatcttctacaaagggtgatattccgttgcttagatctcttgaacaagactcg
tcttcacctctaacgaatggcgtgggtcatcagccagccatggtgccagcgagcgatttt
gaagctggaactctagctgcaaacaggaagttaatgtctttcgaggcacgagatcttaac
tcaagcttatcacgagcccttcctgggtcctttccaaggtctgctgttgattcagggtcg
ccaaagcaaaagaagccagggttggaaagaagagaggacagtggcggggtctctggaagt
tctgatggaaaagacttggagaatggctatgcattaaggtcagatgcagctggttctatt
gggcccacaccacctacatcaaacggtcatggtcatggtcatggtagcgtgcaaagagct
caaactccacttgagcaacaccaacaacagcatgggataggaactacgggtttcgctctg
cagctggtgcaaagaggtctagaagaaagccttggtgccgtccaacgagcaattcatgaa
gaggttcagaatgttcatttggagctacttcgacagttccatatccaacagatggaaatg
agtagcatgatggattcatttttagaaaagcaggcggagctcgttgaggaggtcaaagcc
cttcgtagggaaaatcaacagctacgtgatctttactaa
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