Physcomitrium patens (spreading earthmoss): 112280811
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Entry
112280811 CDS
T01041
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppp03012
]
112280811
Translation factors [BR:
ppp03012
]
Eukaryotic type
Initiation factors
eIF-5
112280811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
AAA_22
Motif
Other DBs
NCBI-GeneID:
112280811
NCBI-ProteinID:
XP_024372431
LinkDB
All DBs
Position
4:complement(19584059..19593936)
Genome browser
AA seq
1458 aa
AA seq
DB search
MSRAGKSGSRAIDKELEDDSRVNGAAQNRKQQKKKGKKGGRFDEDDDFDAIDGAAPSVGS
AEADEAMDPSAAKKKNKKKGGTKKGGFSVLDEEVSDSEAASVNPAEVEKDEAGEEDSVMF
AGRKKGKKGKKDKKASMDDDYPILDPEAEAVVEEAMDIPAAKTKNKKKGGAMKGGFSLLD
EDMSDDEVASASPVVPAVDEAEEEETITFAGKKKGKKGKKDKKASMDDDYPILDLEAEAK
AEEVEEAADLSSAKRNKKKGGAKKGGFSMLDEDASDGEVASVSPVVPDVDEAEEEETITF
AGKKKGKKGKKDKKASMDDDYPVLDPGAEDEVEVQAAIDSSAAKKSSKKGGAKKAAFNML
DDMSDGENASGSPVVSAVDEAEKDEGGEEETLMFAGKKKGKKGKKDKKASKDDEDIDGLI
EELGGHTITEAAAPVPAPATVPAEPKGKQKKKGKKSGRTVQEEEDLDAILAELEGPSKPA
PPAVSVPEAAAPAPPESSAPLAEDEPTAAGGAPPEAEEVVESAAAKKKKKKKEKEKAAKG
GAVDKPAEEVAVEEKKATAKADEAKSKAADKKVPKHVREMQERLARMKEAEEKRLQEEEE
KRRKEEEEQRRLEELERQKEEAKRRRKEREKEKLLQKKKDGKLLTGKKKEEARRLAIMRE
QFGIVADQDSPTGEEAPAPRKPKYETKKKRKPAGQTSAVPAEGEMAEPAVQEPEPEVEPE
PEPEPEPEPEPEPVPEPEPAAPMEVEEDEEEEWDAKSWTEEVNLPAIKSAFAEEEADDGP
VKAGQVTVPPPSAPAAATKPSSPKKKPAPPSKSQAKVVDSEEDEEEDDDDEDSEDDVDVK
KRQQAKVRREARRVEALKKRSAEDLRSPICCILGHVDTGKTKLLDCIRRTNVQEGEAGGI
TQQIGATYFPMENIRERTKELKSDAKLRVPGLLVIDTPGHESFTNLRARGSSLCDIAILV
IDIMHGLEPQTIESLNLLKSRHTPFVVALNKVDRLYGWKSCPNAPIRNALKLQSKDVIGE
FEQRVAFVITQLKEQGLNSELYYKNKELRKFISIIPTSAISGEGVPDILMLLVQLTQKLM
EEKLMYISEVQATVLEVKVVEGLGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTNIRALLT
PHPMKELRVKGTYQHHKELKAAQGIKITAQGLEHAIAGTQLYVVGPEDDVEDMKDEAMQD
MRNVMSRIDKSGEGVCVQASTLGSLEALLEFLKSPAVKIPVSGISIGPVHKKDVMRASVM
LERKRKEFATILAFDVKVTAEAKELAEEVGVRIFTADIIYHLFDQFTAYMNSVKEEKRKE
ASEEAVFPCVMKILPQCVFNKKDPIVVGVDILEGVAKVGTPLCIPSRDGIDIGKIASMEI
NHKVVDTAKKGQTVAMKIVGTNAEENARMFGRHFDLEDELVSRITRRSIDLLKENYRDDL
TTEEWRLVVKLKKLFEIP
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtgctgggaaatcgggctctcgggccatcgacaaggagctggaggacgattcc
cgcgtcaacggagcagctcagaacagaaagcagcagaagaagaaggggaagaagggtggt
cgattcgatgaggatgacgacttcgatgcaatagatggcgcagcaccttctgtgggaagt
gctgaagctgacgaagccatggatccatcggctgctaagaagaagaacaagaagaaaggc
ggaacaaagaaagggggatttagtgtgttggatgaggaagtgtctgatagtgaagctgct
tcggtgaacccagcggaagtagaaaaagatgaagcgggtgaagaggattctgtaatgttt
gcgggcaggaagaaagggaagaaggggaagaaagacaagaaagcctctatggatgatgat
tatcccattctcgatcccgaagccgaagctgtagttgaagaagccatggatattcctgcc
gccaagacgaagaacaagaagaaggggggagcaatgaaaggggggtttagtttattagac
gaggacatgtccgacgacgaagttgcttcagcgagcccagtcgttcctgctgtggacgaa
gccgaggaagaggagactatcacgtttgctggcaagaagaaagggaagaaagggaagaag
gacaagaaggcctctatggatgatgattatcccattctcgatctggaagcagaagccaaa
gctgaagaagttgaagaagctgccgatctgtcgtctgctaagaggaataagaagaaggga
ggagcgaagaaaggggggtttagtatgttggatgaagatgcttccgatggtgaagtggct
tcagtgagcccagtcgttcctgatgtggacgaagccgaggaagaggagactatcacgttt
gctggcaagaagaaagggaagaaagggaagaaggacaagaaggcctccatggatgatgat
tatcctgttctagatcctggagcggaagatgaagtggaagtccaagccgctattgattcg
tctgctgctaagaagagcagcaagaagggaggagcaaagaaagcggcttttaatatgctg
gacgacatgtccgatggtgaaaatgcctcgggcagcccggtcgtatccgctgttgatgaa
gcagagaaggacgaaggcggggaagaggagaccctcatgtttgctggcaagaagaaaggg
aagaaagggaagaaggacaagaaggcctcgaaagatgacgaggacatcgatggtctaatt
gaagagctgggaggacacacgataaccgaagctgcagcaccagtaccagcaccagccacg
gttcctgcagaacccaagggcaaacagaagaagaaggggaaaaagagcggacgaaccgtt
caagaagaagaagatcttgatgctattcttgcggaattggaaggcccaagcaaacctgca
ccccctgctgtgtctgtcccggaggctgctgcgcctgctcctcctgaatcatctgcgcca
cttgcagaggacgaaccgacagctgctggaggtgctcctcctgaagcggaagaggtggta
gaatcggcagctgcgaaaaagaagaagaaaaagaaagagaaggaaaaggctgcaaagggt
ggagcagttgataaacctgcagaggaagtagcagttgaggagaagaaagctacagcaaaa
gcagatgaagctaagagcaaggctgctgacaagaaggtaccaaaacatgtgcgagagatg
caagagcggctggcccggatgaaagaggctgaagagaagaggcttcaagaggaagaagaa
aagcgtcggaaggaggaggaagagcagcggaggctggaggagttggagaggcagaaggaa
gaagcgaagcgaaggcgtaaagagcgcgagaaagaaaagctgctccagaagaagaaagac
ggcaaattgttgactgggaagaaaaaggaggaggctcgacgattggctatcatgcgtgag
cagtttgggattgtagcagatcaggacagccccacaggggaagaggcacctgctcctagg
aaacccaagtatgaaacaaagaaaaagcgcaagccagctggtcaaaccagtgctgttccg
gcagagggtgagatggcagagccagcagtgcaggaaccagaaccggaggtggagccggag
ccggagccggagccagagcctgagcctgagccggagccagttccggaacctgaaccagca
gctccaatggaggtggaagaggacgaagaagaggaatgggatgccaagagctggactgag
gaggttaatcttcctgcaataaagagtgcatttgctgaagaagaagctgacgacgggcca
gtaaaagctggacaggttacagtccctcctccaagtgcccctgcagctgctaccaagccc
tcttctccaaagaagaaacctgcacctccttcgaagtcacaggcgaaggttgttgatagt
gaggaggacgaggaggaggatgatgacgatgaagacagtgaggacgatgtggacgtgaag
aaacgccagcaggcgaaggtgagaagagaggcgcgaagggtagaagctctgaagaagaga
agcgcagaggatctaaggtcaccaatatgctgtatcttgggccacgttgatacaggcaag
acgaagctgctggattgtattcgacgaacaaacgtgcaagagggagaagctggtggtatt
acacaacagataggagctacatatttcccgatggagaacattagggagagaacaaaagag
ctcaaatcggatgctaaactgagggttcctggtcttcttgttatagatacaccaggccac
gagtcttttaccaatctaagggcccggggttccagtctctgtgatatagccattctggtc
attgatatcatgcacgggttggagccacaaaccattgagtcgctcaatcttctcaaatca
cgacatacccctttcgtggtcgccttgaacaaggtggacagattatatgggtggaagagt
tgccccaatgcacctattaggaatgcgttgaagttgcaatccaaggatgtgattggagaa
ttcgaacaacgtgtggcatttgtcatcacgcaactgaaggagcagggattgaattctgag
ctgtactacaagaataaagaactccggaaattcatcagcatcatccctacctctgcaata
agtggggagggtgtcccagatattttgatgctgttagtccagctgacgcagaagttgatg
gaggagaagttgatgtacatcagcgaagtacaggcaacagttttggaggtgaaggtggtt
gagggattggggacaactatcgatgtggtgttggtgaatggtgtactgcatgaaggcgat
caaatagttgtctgcggcatgcagggccctattgtaacaaatatccgagcgctgttgact
ccacatcccatgaaagagcttcgtgtgaagggaacataccaacatcacaaagagttgaag
gcagcccagggtatcaagattacagcacaggggttggagcatgcgattgctggtacccaa
ctgtatgttgtgggtcctgaggatgatgttgaggatatgaaggatgaagcaatgcaagat
atgaggaatgtgatgagcaggattgacaaaagtggtgagggtgtatgcgtgcaagcctct
acacttggatcattggaggccctactggagttcttgaagagcccggctgtcaagattccc
gtcagtggcatcagtattggtccggtgcacaaaaaagatgttatgcgtgctagcgtcatg
ttggaaagaaagcgcaaggaatttgcgacaattttggcttttgatgtgaaggtaactgcg
gaggccaaagagttggcagaagaggtgggcgtccggatttttacggctgatattatatac
catctttttgaccagttcacagcatacatgaattctgtgaaggaagagaagcgaaaggaa
gcgtcggaggaagctgtgtttccttgtgtgatgaaaatcttgcctcagtgcgtcttcaat
aagaaagatccaattgtggttggagttgatatactggagggtgttgccaaggtcggaact
cccctttgtattccttcaagggatggcattgacattggcaagattgcctccatggaaatc
aatcacaaggttgtggatactgcgaagaagggccagacggttgcaatgaagattgttggc
accaatgccgaggagaatgcaaggatgtttggtcgtcatttcgacttggaagacgagctt
gttagtcgcataacccggcgatcaattgatcttctcaaggagaattatcgggatgatctt
actacggaggagtggagactggtggtgaaattgaaaaaattgttcgagatcccgtag
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integrated database retrieval system
