Physcomitrium patens (spreading earthmoss): 112281004
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Entry
112281004 CDS
T01041
Name
(RefSeq) syntaxin-132 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112281004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112281004
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppp04147
]
112281004
Membrane trafficking [BR:
ppp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112281004
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112281004
Exosomal proteins of other body fluids (saliva and urine)
112281004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Med11
FapA
DHC_N2
Occludin_ELL
Wtap
Serine_rich
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
112281004
NCBI-ProteinID:
XP_024372822
UniProt:
A0A2K1KQP7
LinkDB
All DBs
Position
4:complement(22239822..22243824)
Genome browser
AA seq
303 aa
AA seq
DB search
MNDLLGDSAAADGREVDLEAGPFDVPDAGQNMSLFFQEVNDIKSSMAEIRKKFQKLQDTN
DESKNVTKAPTMKALKEKMEQDLDDISKIAQGLKRKLEALDRANVANRKIKGCHEGSSTD
RTRITISSTLKKKLKELMIGFQALRQRFQDEHREVVERRVFTVTGQKVDESVIERLIETG
DSEQIFQRAIQEQGRGQILDTIAELQERHDAVREIEKKLLELHQIFIDMAVLVESQGELL
DSIETQVSKAVEHVAAGTSALQKAKTLQRGTRKCTCVAIFLLLVTAIIVLLAVIQPWKIN
ATK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcttcttggggattctgcagcagcagatggcagagaggtggacctcgaggcg
ggaccttttgatgtcccggacgctggtcaaaacatgtccttgttcttccaagaggttaat
gacatcaaaagctcgatggcggagattcggaagaagtttcagaagttgcaggatacgaat
gacgagtccaagaatgtgactaaagctccaaccatgaaagctctaaaggagaaaatggaa
caggatctagatgacatcagcaagattgctcaaggtttgaagagaaaattagaggccctg
gacagagcaaatgttgcaaaccgtaaaatcaagggttgtcatgaagggtctagcaccgat
cggacacggataactatctcttctactttgaagaagaagctgaaggagctcatgattggt
tttcaggcactgagacaaagatttcaagacgagcaccgggaggtggttgaaaggcgtgtt
ttcacagtcacagggcagaaagtggatgaatcagtcattgaacgcttgattgaaacagga
gacagtgagcaaatttttcaaagggctatccaggagcaggggagaggccagattctggac
acaatagctgagctccaagagcgacatgatgctgttagggaaattgagaagaagctcttg
gaacttcaccagatttttattgacatggcggtgcttgttgaatcgcaaggcgagctactt
gatagcattgaaacccaggtaagcaaagcagtcgaacatgtcgctgcgggcacatctgcg
ctccaaaaggcaaaaaccttgcaaagaggaactcgcaagtgcacgtgtgttgccattttc
ttactgcttgtcacagctatcattgttctccttgctgtaatccagccttggaaaattaat
gctactaagtga
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