Physcomitrium patens (spreading earthmoss): 112281103
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Entry
112281103 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112281103
Enzymes [BR:
ppp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112281103
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
112281103
NCBI-ProteinID:
XP_024373063
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Position
4:complement(16057150..16061719)
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AA seq
663 aa
AA seq
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MNQQLDELIPENDRPHTSGLAGTEVLLVEQSDYVVLDNGIVQVTLTKPGGNVTSIKYGGI
ENLLEYKNKETNRGYWDMNWSHEKGGQDNFLVFFGTIYKVIHKDANRVEVSFLRPYDPAY
PSELPLNVDKRFVLLKGSSGFYSYGIYERPAGWPEFNLNQTRITFKLSNDKFHYMAIADD
RQRFMPSPEDLMPDRSQQLAYPEAHLLTNPIDPAFLGEVDDKYQYSKENKDLKVHGWVST
NPMVGFWIISPSYEFRNGGVTKQNLTAHVGPTCLAMFHSAHYAGLDLCPHFQQGEAWQKV
FGPVFIYLNSAPVGTPYPALWQNAQAQVTREMAAWPYSWPASDAYPKAAERGTLCGRLLV
SDPLQSPYTWVGRNAYLGLAIPGETGSWQSESKGYQFWTQADAYGCFSIRNIRAGLYDLY
GWVPGVVGDYKFERGPIRIQQGGIIDMGDLTYYSPRNGPTVWEIGVPDRTAAGFFVPDPN
PKYVNKLYLNSSQKWRQYGLWERYTELYPTNDLVYTVGQSDWRKDWFYAHLNRIMPDGSY
APTTWEIRFELLKVVPDSPYKLRIATASSHTASIQLFVNKLDYAKPVFDTLQYGRDNATA
RHGIHGLYTLWNIDIEPKLLQVGKNSFYLSQRKDYGPFAAVMYDYLRLEAPASSFPGILD
SAK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaactggacgagctcattcctgagaatgatcggccacatactagtggactc
gccggcaccgaagttttgctcgttgagcaatccgactatgtggtgttggacaatgggata
gttcaagtaacgctaaccaagcctggcggcaatgtaaccagcatcaaatatgggggcatc
gaaaatcttctggaatataagaacaaggagacaaacagaggatactgggatatgaactgg
agtcatgagaagggtggacaagataactttctagttttctttggaaccatctacaaagtc
attcacaaagatgcaaatagagtggaggtttcatttctacggccgtatgatcccgcatat
ccatcagaattgcctctcaatgtcgacaagcgatttgtgcttctgaaaggaagttcgggg
ttctactcttacggcatttatgagcgacccgcaggatggcctgagttcaacctgaaccag
acacgaatcacgttcaagctcagcaatgacaagttccattacatggccatagcagacgac
agacagagattcatgccttctccggaggatttgatgccggacaggagtcagcagcttgcg
taccccgaagcccacctcctgacgaatcctattgaccctgcattcctcggtgaggtggac
gataagtatcagtactccaaggagaacaaggatcttaaagtgcacggttgggtgagtacc
aaccctatggttggtttctggatcatctctccgagctacgaatttcgcaatgggggagtc
acgaagcagaatttgactgctcacgtcggtcctacatgtctggctatgtttcatagcgcg
cattatgctgggctcgatctatgccctcatttccaacaaggggaagcttggcagaaggtt
tttgggcccgtcttcatctacctcaactcagcaccagtcggcactccttatcctgctctt
tggcaaaatgctcaagctcaagtgacgagggaaatggcagcatggccatattcctggccc
gcttcagatgcttacccaaaggcagcagaacgtggcactctttgtggccgcctcctcgtt
tcagatccgttgcagtccccatacacttgggtaggcaggaacgcatacctcggattagcg
atcccaggggagacaggctcatggcaaagtgaaagcaagggctatcagttctggactcaa
gcggatgcttatggatgttttagtattagaaacatccgtgctggcttgtatgatctctat
ggatgggttcccggtgtagtgggagactacaaattcgagcgtggtcccattcgcatacaa
caaggtgggatcatagatatgggtgatttaacatactatagtcctcgaaacgggcctact
gtgtgggagattggcgtccccgaccgcacagcagcaggatttttcgtccccgatccaaat
ccaaaatatgtcaacaagctgtatcttaacagcagccaaaagtggcggcagtatggcttg
tgggagcgatacacagaactgtatcctacaaatgacttggtgtacacagtcggtcaaagt
gactggcgaaaggattggttctatgctcatctcaataggatcatgcctgatggttcctac
gcacctacaacctgggagattcgatttgagctcttgaaagtggtccctgacagcccgtat
aaacttcgtattgcaacggcatcttcacatacagcgtccatccagctgtttgtgaacaaa
cttgactacgcgaaacctgtgtttgacaccctacagtacgggagagacaatgctacagca
cgccacggcatccatggcctttacacgctctggaacattgacatagagccaaaacttctg
caagttgggaaaaacagcttctatctctcacagcggaaagattacgggccttttgcagca
gtcatgtatgattatctgcggctggaagcgcctgcgagtagttttcccgggatcttagat
tcagcgaaataa
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