Physcomitrium patens (spreading earthmoss): 112281110
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Entry
112281110 CDS
T01041
Name
(RefSeq) tubulin alpha chain isoform X1
KO
K07374
tubulin alpha
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04145
Phagosome
ppp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112281110
09142 Cell motility
04814 Motor proteins
112281110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112281110
03036 Chromosome and associated proteins [BR:
ppp03036
]
112281110
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppp04812
]
112281110
04147 Exosome [BR:
ppp04147
]
112281110
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112281110
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112281110
Cytoskeleton proteins [BR:
ppp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112281110
Exosome [BR:
ppp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112281110
Exosomal proteins of other body fluids (saliva and urine)
112281110
Exosomal proteins of colorectal cancer cells
112281110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
112281110
NCBI-ProteinID:
XP_024373068
LinkDB
All DBs
Position
4:1170345..1172260
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKSVGGGDDAFNTFFSETGAGK
HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEDGGEDDGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgcatttcgatccacatcggtcaggccggtatccaggtcggaaacgcctgc
tgggagctgtactgtttggagcatggcattcagcctgatggacagatgccaagtgacaag
tcggtgggaggaggagacgacgccttcaacactttcttttcggagacaggagccgggaag
cacgttcctcgtgcggtgtttctcgatttggagccgactgtgatcgatgaggtgcgcacc
ggaacgtaccgtcagctgttccacccggagcagctgatcagcgggaaggaggacgcggcg
aacaacttcgcccgtggtcactacactatcgggaaggagatagtggacctgtgccttgac
cggattaggaagctggcggacaactgcacgggtctgcagggcttccttgtgttcaacgct
gtgggaggaggaacgggatctggtttgggaagtctgctgctggagcgcctgtccgtggac
tacgggaagaagtcgaagctcgggttcacagtgtatccatcgccacaggtgtcgacctcc
gtggtggagccatacaacagtgtgctgtcgacgcactcgctgttggagcacaccgacgtg
gctgtgctgctggataatgaagcgatatacgacatttgtcggaggtctttggacatcgag
cgcccaacttacacgaacttgaaccggctggtgtctcaggtcatctcctccttgaccgcg
tcactccggttcgacggtgcgctgaatgtggatgtgacggagtttcagaccaacttggtg
ccataccccaggattcacttcatgctgtcgtcgtacgcaccagtgatatcggcggagaag
gcgtaccacgagcagctgtcggtggcggagatcacgaactctgcgttcgagccgtcatct
atgatggcgaagtgcgatcctcgtcacggcaagtacatggcgtgctgcctgatgtacagg
ggagacgtggttccgaaggacgtgaatgccgcggtggcgacgattaagacgaagaggacc
atccagtttgttgactggtgtcccactggattcaagtgcggcatcaactaccagccaccg
acggtggtgccgggtggagatctggcgaaggtgcagagggcggtgtgcatgatttcgaac
agcacgagcgttgcagaggtgttctcccggatcgaccataagttcgatctgatgtacgcg
aagcgcgctttcgtgcactggtatgtgggcgaaggtatggaggagggagagttttcggag
gctcgtgaggatcttgcggctctggagaaggattacgaggaagtgggtgcggagtcggct
gaggacggcggcgaagacgacggtgaagagtactga
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